Bordetella holmesii ATCC 51541: D560_1307
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Entry
D560_1307 CDS
T03052
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
D560_1307 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bho01007
]
D560_1307 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bho03016
]
D560_1307 (aspS)
03029 Mitochondrial biogenesis [BR:
bho03029
]
D560_1307 (aspS)
Enzymes [BR:
bho01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
D560_1307 (aspS)
Amino acid related enzymes [BR:
bho01007
]
Aminoacyl-tRNA synthetase
Class II (A)
D560_1307 (aspS)
Transfer RNA biogenesis [BR:
bho03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
D560_1307 (aspS)
Prokaryotic type
Other AARSs
D560_1307 (aspS)
Mitochondrial biogenesis [BR:
bho03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
D560_1307 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AHV91838
LinkDB
All DBs
Position
complement(1234231..1236021)
Genome browser
AA seq
596 aa
AA seq
DB search
MRTCYTGQVCRDHLGQTVTLYGWVNRRRDHGGVIFIDLRDRAGLAQIVFDPDNADAFGTA
ERLRNEFCVRVTGLVRERPAGTTNAELASGEIEVLCREVEILNASVTPPFQLDDDNLSET
TRLTHRVLDLRRPQMQRNLMLRYRVSIEVRKFLDQLGFIDIETPMLTKSTPEGARDYLVP
SRVNAGHFFALPQSPQLFKQMLMVSGFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFL
TETEIRAIFESMIRHVFKVVQDVDLPESFPMMTWTEAMARYGSDKPDLRVNLEFTDVTDV
MRDVDFKVFASAATTAGSRVVALRVPGGAELSRSEIDAYTQFVGIYGAKGLAYIKVNEAG
KGREGLQSPIVKNLHDAALAELVKRSGAQDGDIIFFGADRAKVVNDAIGALRVKIGHSEF
GKRTGLFTGGWRPLWVVDFPMFEYDEEEGRYTAAHHPFTSPKDGHENFLETDPGKAFAKA
YDMVLNGWEIGGGSVRIHREEVQSKVFRALKIGAEEAREKFGFLLDALRYGAPPHGGIAF
GLDRIVTMMTGAESIRDVIAFPKTQRAQCLLTQAPSSVDDKQLRELHIRLRNTEVK
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacctgctataccggccaggtttgccgtgaccatctcggccagactgtcaccctg
tacggctgggtgaaccgccgccgcgaccacggtggggtgatttttatcgatttgcgcgat
cgcgccggcctggctcagatcgtgttcgatccggacaatgccgacgcgtttggcaccgct
gagcgtctgcgcaacgagttctgcgtgcgcgtgaccggcctggtgcgtgagcgtcccgca
ggcaccaccaacgccgaactggcctcgggcgagatcgaggtattgtgccgcgaggtcgag
atcctgaacgcgtcggtgacgccgcccttccaactcgatgacgacaacctgtcggaaacg
actcgtctgacgcaccgtgtgctggacctgcgccgcccgcagatgcagcgcaacctgatg
ctgcgctatcgggtctccatcgaagtgcgcaaattcctggatcaactgggcttcatcgac
atcgaaacgccgatgctgaccaagagcacgcccgaaggtgcccgcgactatctcgtgcct
tcacgtgtgaacgccggtcatttctttgctctgcctcagtcgccgcagctgttcaagcag
atgctgatggtctcgggctttgaccgctactaccagatcaccaagtgcttccgcgacgag
gatctgcgcgctgaccgccagccggagttcacgcagatcgattgcgaaacctccttcctg
accgagaccgagatccgtgccatcttcgagagcatgatccgccacgtcttcaaggtggtg
caggacgtcgatcttcccgagtccttccccatgatgacctggaccgaggccatggcgcgc
tacggttcggataagcccgatctgcgcgtgaacctcgagttcaccgatgtgaccgacgtc
atgcgtgacgtggacttcaaggtctttgcctcggcggccaccaccgcaggcagccgggtg
gttgctctgcgcgtgccgggcggcgccgagctctcgcgcagcgagatcgatgcctacacc
cagttcgtcggcatttacggagccaagggcctggcctatatcaaggtcaacgaagcgggc
aagggccgagaaggattgcagtcgccgatcgtcaagaacctgcacgacgccgcgctggcc
gaactggtcaagcgcagtggcgcccaggatggcgacatcatcttctttggtgccgatcgt
gccaaggtcgtcaacgatgccatcggcgcgctgcgcgtgaagatcggccacagcgagttc
ggcaagaggacaggcttgttcaccgggggctggcgcccgctgtgggtggtggattttccg
atgttcgagtacgacgaagaagagggccgctacaccgcagcccaccatccgttcaccagc
cccaaggacggccacgagaacttcctcgaaaccgatccgggcaaggcgttcgccaaggcc
tacgacatggtgctcaacggttgggaaatcggcggcggctccgtgcgtatccaccgcgaa
gaagtgcagagcaaggtcttccgcgcactgaagatcggcgccgaggaggcccgggagaag
ttcggcttcctgctcgatgcgctgcggtacggtgcgcctccgcacggcggtatcgcattt
ggcctggatcgtatcgtcaccatgatgacgggcgccgagtccatccgcgacgtgatcgcc
ttcccgaagacgcaacgcgctcagtgcttgctgacgcaagcgccttcgtcggttgatgac
aagcaattacgcgagctgcatatccgcctgcgcaataccgaagtgaaatga
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