KEGG   Bordetella holmesii ATCC 51541: D560_2737
Entry
D560_2737         CDS       T03052                                 
Name
(GenBank) delta-1-pyrroline-5-carboxylate dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
bho  Bordetella holmesii ATCC 51541
Pathway
bho00250  Alanine, aspartate and glutamate metabolism
bho00330  Arginine and proline metabolism
bho01100  Metabolic pathways
bho01110  Biosynthesis of secondary metabolites
Module
bho_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:bho00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    D560_2737
   00330 Arginine and proline metabolism
    D560_2737
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:bho03000]
    D560_2737
Enzymes [BR:bho01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     D560_2737
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     D560_2737
Transcription factors [BR:bho03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    D560_2737
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PutA_1st PRODH
Other DBs
NCBI-ProteinID: AHV91033
LinkDB
Position
2564055..2567861
AA seq 1268 aa
MASTTLGVKVDDALRDRLKAAAQKLQCTPHWLHKQALVAYLEKIERGHLPPEMAHLARED
ESSEEAFDAGPTPPFYEFGQDVQPQSVLRAAITSAYRRPEPECVPLLLGQARMPHLEKIH
TMAARLVQTLRDKRTGGGVEGLIQEFSLSSQEGVALMCLAEALLRIPDRATRDALIRDKV
ARGDWKSHMGGAQSLFVNAATWGLMITGKLVAVSSEQSLSKALTRLIGKGGEPLVRKGVN
MAMRMMGEQFVSGQTISEALANNRKLEARGVRYSYDMLGEAATTAEDADRYNAAYEQAIH
AIGKAAAGRGIYEGPGISIKLSALHPRYARAQRERVIRELLPRIRHLAILARQYDIGLNI
DAEEADRLEISLDLLESLCFTPELEGWSGIGFVIQAYQKRAPFVIDYVVDLARRSGHRLM
IRLVKGAYWDSEIKRAQVDGLEGYPVYTRKVYTDVAYLACARKLLAAPEAVYPQFATHNA
YTVAAIYHLAGQNYYPGQYEFQCLHGMGEPLYDEVVGAAGQGKLNRPCRIYAPVGTHETL
LAYLVRRLLENGANTSFVNLIGDDSISVEQLVADPVQAAARIVPLGAAHEKIPLPRDLYG
SARANSAGLDLSNEHRLGSLSAALQAGAATPWRAMPMLGDAESAWDEARAMDVLNPADQR
DVVGRVMEADAQAVDAALRAAGNAAPIWQSTPVQARAQCLRRAARLLEEQMQTLLGLIVR
EAGKTLSNAIAEVREAVDFLRYYADQVEREFDNDTHRPLGPVLCISPWNFPLAIFTGQVA
AALAAGNTVLAKPAEQTPLIAAQAVGILRAAGIPPGAVQLLPGKGETIGAALVAHPGVRG
IMFTGSTEVARLIARQLADRLDDRGHTIPLIAETGGQNAMVVDSSALAEQVVADVLISAF
DSAGQRCSALRVLCVQEDSADHVLTMLRGAMRELRMGNPDRLSTDVGPVIDSEARQNILR
HIDEMRAAGHDVVQIEGTPECRFGNFVPPTLIEIKDIAELKREVFGPVLHVLRYARGDLD
SVLNSINATGYGLTFGVHTRIDETVVRVAESVQAGNIYVNRNIVGAVVGVQPFGGENLSG
TGPKAGGPLYLYRLLSLRPGGLPPSLAGAGRMPLDVTLPGPTGETNTYRVEPRGAVYCVA
ATIAGARAQWEAARLTGNLAWFADTPAARDWLDSMDPATVQEQVAILDDSEVDLADFQAV
LFEGDGDTLRHLNQRIAAREGPILAVHGLSPDEVAAGVAYAPERLLNERAISVNTAAAGG
NASLMTIG
NT seq 3807 nt   +upstreamnt  +downstreamnt
atggcaagcaccaccctgggcgtcaaggttgatgacgcattgcgagatcgcttgaaagcg
gcagcccaaaagctgcagtgcacgccccactggctgcacaaacaggcgctggtcgcttat
ctggaaaaaatcgagcgcgggcatctgccgcccgagatggcacacctggcccgagaggac
gagagctcggaagaggcgttcgatgccggcccgacgccgcctttttacgagtttggccag
gatgttcagccgcagtcggtcctgcgcgcggcgatcacgtcggcctaccgacgcccggaa
cccgagtgtgtgcctcttttattgggccaggcccgcatgccgcacctggagaaaatccac
accatggctgccaggctcgtgcagacgctgcgcgataaacgtaccggcggcggtgtcgag
gggctgattcaggagttttcgctctccagccaggagggtgtggcattaatgtgtcttgcc
gaggccttgttgcgcatcccggatcgcgccacgcgtgatgcgcttatccgtgacaaggtt
gcccgcggcgactggaagtcgcatatggggggggcgcagtcgttgttcgtcaatgccgcg
acctgggggctgatgatcaccggcaagctcgtggcggtaagcagcgagcaatccctgtcg
aaagccctgacgcgtttgataggcaagggcggcgagcccttggtgcgcaagggcgtgaac
atggccatgcgcatgatgggcgagcagttcgtgtcgggccagacgatctcggaggccttg
gccaacaaccgcaagctcgaagccaggggggttcgctattcctacgatatgctcggcgag
gcagccaccacggccgaggacgccgaccgctacaacgcggcctatgagcaggccatccat
gccataggcaaggccgcggccgggcggggcatttacgaaggcccgggcatttccatcaag
ctttcggcgttgcatcctcgctatgcccgcgcgcaacgcgagcgagtgatccgggaattg
ctgccgcgcattcgtcatctggccatcctggcacgccagtacgatatcggcctgaatatc
gatgccgaagaagccgatcgactcgaaatctcgctcgacctgctcgagtccttgtgcttt
acccccgagctcgagggctggagcggcatcgggttcgtcattcaggcctaccagaagcgc
gcgcctttcgtcatcgactatgtcgttgaccttgcccggcgcagcggtcatcgcctgatg
atccgcctggtcaagggcgcatactgggacagcgagatcaagcgggcccaggtggacggc
ctggagggttaccctgtctacacgcgtaaggtttacaccgacgtggcgtatctggcctgc
gcgcgcaagctcctggccgcgcccgaggccgtctatcctcagttcgccacgcacaacgcc
tacaccgtggcggccatttatcatctggccgggcagaactactacccgggccagtatgag
ttccagtgcctgcatggcatgggcgagccgctctatgacgaagtggtgggggccgcgggg
cagggtaagctgaatcgtccttgccgtatttatgcccctgtcgggacgcatgaaacgctg
ctggcttatctggtgcgccgcctgctggaaaacggcgccaacacgtccttcgtcaatctg
atcggcgatgacagtatttcggtcgagcaattggtcgcggatcccgttcaggcggcagcc
cgtatcgtgccactgggcgctgcccacgaaaaaatccctctgccgcgggacctttatggc
agcgcgcgagccaattccgccggtctggatctgtccaacgagcaccggctgggttcgctg
tcggccgcgttacaggccggcgccgccacgccctggcgcgcgatgcccatgctaggcgac
gccgaatccgcctgggacgaggcgcgcgccatggacgtgctcaatccggctgaccagcgc
gatgtcgttggccgcgtcatggaggccgacgcacaggccgtcgacgccgcactgcgtgcc
gcaggtaatgccgcgccaatctggcaatccactccggtgcaggcccgggcccagtgcctg
cggcgtgcggcccgattgctcgaagagcagatgcagacattgcttggtctgatcgtgcgc
gaggcgggtaagaccttgtccaacgccatcgccgaggtacgcgaagccgtagattttctg
cgttactacgccgaccaggtcgagcgcgaattcgacaacgatacccatcggcctctgggt
cctgtgctgtgtatcagcccatggaatttccctttggccattttcaccggacaggtcgct
gcggcgctggccgcgggtaatacggtgttggccaagccggccgaacagacgccgctcatt
gcggcgcaggcggtgggcattctgcgcgctgccggcattccgccgggagccgtgcaactt
ctgcccgggaagggagaaaccatcggtgcggccctggtggcgcatccgggtgtgcgcggc
atcatgtttacgggttcgaccgaggtcgcgcggctgatcgcccgtcaactcgccgaccgg
cttgatgaccgtggccataccattccgctcattgccgaaaccggcggccagaacgccatg
gtggtggactcttctgccctggccgagcaagtggtggccgacgtgctgatttcggcgttt
gactctgccgggcagcggtgttcagcgttgcgcgtgctgtgcgtgcaggaggatagcgcc
gaccatgtcttgaccatgctgcgtggcgcgatgcgagagttacgcatgggcaatcctgac
cggctcagcaccgatgtcgggccggtgatcgattccgaggcgaggcagaacatcctgcgt
catatcgacgagatgcgagcggccggccacgatgtggtgcagatagaaggtaccccggaa
tgccggtttggcaatttcgtgccgcccacgctcatagagattaaagatattgccgagctc
aagcgggaagtgttcggcccggtgctccacgtattgcggtatgcccgcggcgatttggat
agtgtgctcaacagtatcaatgccacgggttacgggctgactttcggcgtgcatacccgt
atcgatgagacagtggtgcgcgttgccgagtcggttcaggcgggcaatatctacgtcaac
cgcaatatcgtgggtgccgttgtgggggtacagcccttcggaggggaaaatctgtccggc
acggggcccaaagcgggcggcccgctctatctctaccgccttttgtcgctgcggcctggc
ggcttgccgccatcgcttgccggtgcaggccgaatgcctttggacgtgaccctgcccggt
cccaccggagagaccaatacgtatcgagtcgagccccgcggcgccgtgtactgcgtcgca
gccacgatcgcgggcgcgcgcgcgcaatgggaggcggcgcgcctgaccggaaatctcgcc
tggtttgccgatacgcctgctgcacgtgactggcttgattcgatggatccggcaactgtg
caggagcaagtcgccatactggacgacagcgaagtcgatctggcggattttcaggcagtc
ctgtttgaaggcgatggcgacacgctacgccacctcaatcaacgtattgccgcgcgtgaa
gggccaattttggccgtccatggcctgagtcccgatgaagtggccgcaggggtggcctat
gcgcccgagcgcttgctcaatgagcgggcaatcagtgtcaataccgcggcggctggaggt
aacgccagtctcatgacgattggttag

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