Bordetella holmesii ATCC 51541: D560_2804
Help
Entry
D560_2804 CDS
T03052
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
bho
Bordetella holmesii ATCC 51541
Pathway
bho00061
Fatty acid biosynthesis
bho00071
Fatty acid degradation
bho01100
Metabolic pathways
bho01212
Fatty acid metabolism
bho02024
Quorum sensing
Module
bho_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bho00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
D560_2804 (fadD)
00071 Fatty acid degradation
D560_2804 (fadD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D560_2804 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bho01004
]
D560_2804 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bho04147
]
D560_2804 (fadD)
Enzymes [BR:
bho01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
D560_2804 (fadD)
Lipid biosynthesis proteins [BR:
bho01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
D560_2804 (fadD)
Exosome [BR:
bho04147
]
Exosomal proteins
Exosomal proteins of breast milk
D560_2804 (fadD)
Exosomal proteins of breast cancer cells
D560_2804 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
LpxD
Motif
Other DBs
NCBI-ProteinID:
AHV91925
LinkDB
All DBs
Position
complement(2624948..2626612)
Genome browser
AA seq
554 aa
AA seq
DB search
MERIWLRNYPQGVPADIQATGTLLDVLEEAFERFADKTAYMSMGAELRYGDVERLSRNLA
NWLRAQGLAPGDRVAVMMPNMLQYPLAAFGILRAGCVVVNCNPLYTARELRHQLADSGAR
AIIIAENFAATLQAVLPDTKIKHIVVTSVGDMLRPFKARLVNFMLRRVRKLVPAWTLPGH
TTWHSALHLGSQHVYERPDVAGADLAFLQYTGGTTGTAKAAMLSHLNMVANLNQAHAWIR
PLATEGKECVVTALPLYHIFALTANCLTFLKLGARNLLILNPRDIRAMVRELRRHPFTCF
TGVNTLFYALLDSKDFRALDFSPLRLTLGGCMAVQKTVAERWREVTGKPLAQAYGLTEAS
PAVALNPLDQKDFNGSVGLPVPATDISIRDEHGQEIAPGQSGEICVRGPQVMSGYWQQAA
ETARAFYPQGFLRTGDMGYVDPEGYLFLVDRKKDLILVSGFNVYPSEVEEVAATCPGIRE
AAAVGWPDERSGEAVKLFVIATDPALTEKSVIDYCRRYLTGYKVPRHVVFRNELPRSNVG
KILRRKLREESLAQ
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaatctggctacgcaactacccacaaggcgtgccggccgacatacaggccacc
ggcaccctgctcgacgtcctggaagaagcctttgagcgctttgccgacaagacggcttat
atgagcatgggcgcggagctacgttatggggacgtcgaacgcctttcgcgcaacctggcg
aactggctacgcgctcagggcctggcgcccggcgaccgcgtggcagtgatgatgcccaat
atgctccaataccccttggccgccttcggcattctgcgtgccggctgcgtggtggttaat
tgcaacccgctctacacggcgcgcgagttgcgccaccaattggccgactccggcgcccgc
gccatcatcatcgcggagaacttcgccgccacgctgcaggccgtcctccccgacacgaag
ataaagcacatcgtcgtcacctcggtgggcgatatgttgcgtccgttcaaggctcggctc
gtcaatttcatgctccgccgcgtccgaaagctcgtgccggcctggacgctgccaggccac
actacctggcacagcgcgctgcacctgggtagccaacacgtctatgagcggcccgatgtc
gccggcgccgatctcgccttcctgcaatacacaggtggcaccacaggcacggccaaggcc
gccatgttgagccacctcaatatggtggcaaacctgaaccaggcccatgcgtggatacgg
ccactggcgaccgaaggcaaagaatgcgtggtcaccgcgctccccctctaccatatcttt
gccctcacggcgaactgcctgacctttctaaagctgggcgcgcgcaatctgctcatcctc
aatccgcgcgacatccgcgccatggttcgagaactgcggcgtcacccctttacgtgcttt
accggcgtcaatacgctgttctacgcactgctcgacagcaaggatttccgggccctggac
ttcagcccgctacgcctgacactgggaggctgcatggcggtacagaaaacggtggccgag
cgctggcgcgaggtcaccggcaagccgctggcgcaagcctatggcctgaccgaagcgtca
cctgccgtcgcgctcaacccgttggatcagaaggacttcaacggctcggtcggcctgccg
gttcccgccaccgacatttcgatccgcgatgaacacggccaggaaatcgcccccggacaa
agcggcgaaatctgcgtgcgcgggccacaagtcatgagtggctattggcagcaggcggcc
gaaaccgcgcgcgccttctatccccaaggcttcctgcgcacgggcgatatgggttacgta
gatccggaaggctatctgtttctggtcgatcgcaagaaagacctgatcctggtctcaggc
tttaatgtctatccgagcgaagtcgaagaagtggccgcgacctgccccggcatccgagag
gcggccgccgtgggttggcccgacgaacgctccggcgaagccgtcaagctgtttgtcatc
gccactgatccggcactgacagaaaaaagcgtgatcgactattgcaggcgctacctgaca
ggctacaaagtgccgcgccacgtggtgtttcgcaacgagctgccaaggagcaacgtaggc
aagatattgcggcgaaagctgcgcgaagaaagcctcgcccaataa
DBGET
integrated database retrieval system
