Bisgaardia hudsonensis: A6A11_08970
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Entry
A6A11_08970 CDS
T06663
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bhud
Bisgaardia hudsonensis
Pathway
bhud03030
DNA replication
bhud03410
Base excision repair
bhud03420
Nucleotide excision repair
bhud03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A6A11_08970
03410 Base excision repair
A6A11_08970
03420 Nucleotide excision repair
A6A11_08970
03440 Homologous recombination
A6A11_08970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhud03032
]
A6A11_08970
03400 DNA repair and recombination proteins [BR:
bhud03400
]
A6A11_08970
Enzymes [BR:
bhud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A6A11_08970
DNA replication proteins [BR:
bhud03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
A6A11_08970
DNA repair and recombination proteins [BR:
bhud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
A6A11_08970
NER (nucleotide excision repair)
GGR (global genome repair) factors
A6A11_08970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QLB13731
LinkDB
All DBs
Position
1963808..1966603
Genome browser
AA seq
931 aa
AA seq
DB search
MAKIAENPLVLVDGSSYLYRAYHVFQNSGRPLTNSLGEPTGAMYGVLNMLKSLIAQVQPS
HIAVVFDAKGKTFRDEMYEQYKSHRPPMPDDLRQQILPLHNIIKALGIPLLCIEGVEADD
VIGTLAKQAAEQGKKVLISTGDKDMAQLVNENIMLINTMNNTLLDSEGVIEKYGIPPVLI
IDYLALMGDASDNIPGVPGVGEKTALGLLQGIGSMSDIYANLDKVATLPIRGAKSLADKL
NAAKKEADLSYALATIKTDVELAITTEQLTLGQANKDELIEYFGRYEFKKWLNEVIEGES
SVTNGTSQATKINYSQSTFSKTESAVQISVDRDKYECILTQIQLDTWCEKLSDAKLIALD
TETDSLDYMSAKLVGISFALENGEAAYLPLGHDYIDVEKQLDFSTALTQLKPILENPNIQ
KVGQNFKYDLTIFARYDINVQGVTQDTMLQSYVLDSTGRHNMDDLAKRYLDHDTITFEEI
AGKGKGQLTFNQIPLEQASRYAAEDADVTMKLHQVLWEKLQQEPKLIKLFQTIELPLLSV
LSRIERNGVLIDTEALFLQSNEFATRLSQIEQQAYELAGETFNLSSPKQLQEILFNKLGL
PVIKKTPKGAPSTNEEVLEELAYEHELPKLLVEHRGLSKLKSTYTDKLPQMVNKETGRVH
TSYHQAITSTGRLSSSDPNLQNIPIRNDAGRRIRQAFIAREGFSILAADYSQIELRIMAH
LSKDEGLINAFKEGKDIHRSTAAEIFGLPLEEVTSEQRRSAKAINFGLIYGMSAFGLSRQ
LGIPRNDAQKYMDLYFQRYPKVQHFMLNIRETAKTQGYVETLFGRRLYLPDINSSNAMRR
KGAERLAINAPMQGSAADIIKRAMIAIDKEIRNNDDILMIMQVHDELVFEVRSEKIAEFS
KLIKNLMEKASELVVPLIVDVGIGENWDQAH
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaattgcagaaaatccccttgtccttgttgatggttcatcttatttatatcga
gcttaccacgtttttcaaaactcgggacgaccactaactaattcccttggagaaccaaca
ggtgcaatgtatggtgtattaaatatgctaaaaagcttaatcgctcaagtacagcctagc
catattgccgtagtatttgatgccaaaggaaaaactttccgagatgaaatgtatgaacaa
tataaatctcatcgccctccaatgcctgatgatttacgtcaacaaattttaccactacat
aatattattaaagcattaggtatcccattactttgtattgaaggcgttgaagccgatgat
gttatcggtacattagccaaacaagctgcggaacaaggtaaaaaagtattaattagcacg
ggcgataaagatatggcacagctagttaatgaaaatattatgctgattaatacaatgaat
aatacattattagattcagaaggcgttattgaaaaatatggcattccaccagtacttatc
attgattatctcgcattaatgggtgatgcttcagataatattcctggtgtgccaggtgtg
ggggagaaaactgccttaggattattacaaggtatcggcagtatgtcagatatttatgct
aacttagacaaagtggcaactttacccattcgtggagcaaagagtttagcggataaatta
aatgcagccaaaaaagaagccgatttatcttatgctcttgccactatcaaaactgatgtg
gaattagctatcacaaccgaacaactcactttaggtcaagcgaataaagacgaattaatt
gaatattttggtcgctatgaatttaagaaatggttgaatgaagtaatagaaggagaaagc
tcggtcaccaatggcacatcacaagccacaaaaataaattattcacaatctactttctca
aaaactgaaagtgcggtacaaatttctgtagatcgtgataaatatgaatgtattttgaca
caaattcaactggatacttggtgtgaaaaactaagcgatgcaaaattgatcgcactagat
acagaaactgatagcctagattatatgtctgcaaaactagtaggaatttcttttgctcta
gaaaatggggaagccgcttacttacctttaggacacgattatattgatgtagaaaaacaa
ttagatttttctaccgcacttactcaattaaaaccgattttagaaaatccaaatatccaa
aaagtcggacaaaatttcaaatatgatctaacaatttttgctcgttatgatattaatgtt
caaggcgttacccaagatacgatgctacaatcttatgtattagatagcacagggcgtcac
aatatggacgatctagctaaacgctatttagaccatgatacgatcacctttgaagaaata
gcaggaaaaggcaaagggcaacttacctttaatcaaatcccattagagcaagcctctcgc
tatgctgcggaagatgcagatgtaacaatgaagttacatcaagtattatgggaaaaattg
caacaagagccaaaattaatcaaactgtttcaaaccattgaattgcctttattaagtgta
ctttctcgtattgaacgtaatggcgtactaattgacactgaggccttattcttacaatct
aatgaatttgcaacccgcttatctcaaattgagcaacaagcttatgagctagctggagaa
acctttaatctatcctcaccaaaacaattacaagaaattttatttaataaattaggctta
cctgtaatcaaaaaaacaccaaaaggtgcaccgtcaactaatgaagaagttctagaagaa
ttagcctacgaacacgaattgccaaaattattagtagaacatcgtggattgagtaaatta
aagtcaacttacacagataaactaccacaaatggtaaataaagaaactggacgagttcat
acttcctaccatcaagcaattaccagtaccggacgtttgtcatctagtgatccaaattta
caaaatattcccattcgtaatgatgcaggacggaggattcgccaagcctttattgcaaga
gaaggatttagcattcttgctgcggattattcccaaattgaactacgcattatggcacat
ctttctaaagatgaaggactaattaatgcctttaaagaaggaaaagatattcaccgctcc
acagcggcagagatttttggattacccctagaagaagtaacatcagaacaacgccgtagt
gctaaagcgattaattttggactaatttatggtatgagtgcatttggactttctcgccaa
ttaggtattccaagaaatgatgctcaaaaatatatggatctttacttccaacgctatcct
aaagtacagcattttatgctcaatattcgtgaaacagcaaaaacacaaggttacgttgaa
accttatttggtcgccgtctatacttacctgatattaattcatctaatgcaatgcgtcgt
aaaggtgctgaacgtttggcaattaatgctccaatgcaaggctcggctgctgatattatc
aaacgagcaatgatcgctattgataaagaaatccgaaataatgatgatattctgatgatt
atgcaagtacacgatgaattagtgttcgaagtgcggtcagaaaaaattgcagaatttagt
aagttaattaaaaatttaatggaaaaagcttcagaattagttgtgccattaattgttgat
gtcggcattggtgaaaactgggaccaagcacattaa
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