Bifidobacterium indicum: BINDI_0197
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Entry
BINDI_0197 CDS
T03564
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
bii
Bifidobacterium indicum
Pathway
bii00470
D-Amino acid metabolism
bii00550
Peptidoglycan biosynthesis
bii01100
Metabolic pathways
bii01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
bii00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BINDI_0197
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BINDI_0197
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BINDI_0197
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bii01011
]
BINDI_0197
Enzymes [BR:
bii01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
BINDI_0197
Peptidoglycan biosynthesis and degradation proteins [BR:
bii01011
]
Precursor biosynthesis
Amino acid ligase
BINDI_0197
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_4
GARS_A
Motif
Other DBs
NCBI-ProteinID:
AIC91482
UniProt:
A0A087VSZ7
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All DBs
Position
321510..322673
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AA seq
387 aa
AA seq
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MARKRVVVLYGGRADEHSISCVSAAGVLNAIDTDRYEPIPVGITKDGRWIVGGEDPRRWS
LDDTQLPTVQVTEGSRPVILDMARGGDGFMVGDHDDLVSGPDSLKTDSPQASGSLEPLGH
VDAVFPVLHGPYGEDGTVQGLLEMMGVPYVGCGVFASAACMDKHYTKILLSQAGIPVAPG
ITIDARDRLSGVALKAAVEEAGLHYPLFVKPSRAGSSFGVVKVEETGADALAAAVDEASG
HDWRILIEEGVDGREIECAVLAPDREGEPRTAWPGEVVLDRTDQDEAFYDFDSKYVDSSA
SHVEVPADLPDETLSRIRALASRAFKAVDATGLSRVDCFVTAKGGIIVNEINTLPGFTPI
SMYAKAWEASGVTYTDLITELIEGVSA
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggccaggaaacgtgttgtcgtgctgtatggcggtcgtgccgacgagcactccatatcc
tgtgtatcggcggccggtgtgctcaatgccatcgataccgaccgctatgagcccattccg
gtcggaatcaccaaggacggtcgttggatcgtcggcggcgaggatcccaggcggtggagc
ctggacgacacccaattgcccaccgtgcaggtcaccgagggcagtcgtccggtcattctc
gacatggcccgtggcggggatgggttcatggtcggtgatcatgacgacctggtttccggt
cccgacagcctcaaaacggactccccgcaggcctccggctctttggaacctctggggcat
gtggatgcggtctttccggtgctccacggcccgtatggtgaggacggcaccgtacagggg
ctgctcgaaatgatgggtgtgccctatgtgggatgtggggtcttcgcctctgccgcctgc
atggacaagcactatacgaagattcttctcagccaggccggtattcccgtggcaccggga
atcaccatcgatgcccgcgaccgcctgtccggtgttgctctgaaggccgctgtggaagag
gctgggctgcattatccgcttttcgtcaagccctcccgcgccgggtcgagcttcggtgtg
gtcaaggtggaggagaccggtgccgatgctctggccgctgccgtcgatgaagcatccggg
catgactggcggatcctgattgaagagggtgtggacggccgtgaaatcgagtgtgccgtg
ctcgctcccgaccgcgaaggtgaaccccgcaccgcatggcccggcgaggttgtgctggac
aggacggaccaggatgaggccttctacgacttcgacagcaagtatgtggactcctcggcc
tcccatgtggaggtccccgccgacctgcccgacgagaccctgagcaggatacgtgccctt
gcctccagggccttcaaggccgtagatgctaccggtctgagccgtgtcgactgctttgtc
accgccaagggcggaatcatcgtcaacgaaatcaacaccctgcccggctttactcccata
tcgatgtacgccaaggcctgggaggccagcggtgtcacctacaccgacctgattaccgag
ctgatcgagggtgtatcagcctga
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