Bifidobacterium indicum: BINDI_0990
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Entry
BINDI_0990 CDS
T03564
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
bii
Bifidobacterium indicum
Brite
KEGG Orthology (KO) [BR:
bii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bii03019
]
BINDI_0990
03009 Ribosome biogenesis [BR:
bii03009
]
BINDI_0990
Messenger RNA biogenesis [BR:
bii03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BINDI_0990
Ribosome biogenesis [BR:
bii03009
]
Eukaryotic type
Pre-60S particles
RNases
BINDI_0990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AIC92253
UniProt:
A0A087VVJ3
LinkDB
All DBs
Position
complement(1285771..1286472)
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AA seq
233 aa
AA seq
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MSDKSDLTFSAEESRMIWIDCEMTGLDIFHDELCEVSVVPTDFNMKVLDKGIDLVIKPSQ
SALDHMDDFVRHMHTSSGLIEEMKTGLTLDEAQRQVIEYITPFLPEHGKAHLAGNSVGSD
KKFLDRYMPDLMGLLHYRVIDVSTLKELSRRWYPDVYRNKPAKHGGHRALADIIESMDEL
RYYRSMFFTPAPGPDAARSKDGAAEIERTSLLRHYEESGNPIEDAGSPEKTDY
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaagagtgatctgaccttcagtgccgaggaatcccgcatgatctggattgat
tgcgagatgaccggtctggatatcttccatgacgagctgtgcgaggtctccgtggttccc
accgacttcaacatgaaagttctggacaagggcatcgacctggtcatcaaaccctcccag
tcggccctggaccatatggatgacttcgtcaggcacatgcatacttcctccggactgatc
gaggagatgaagaccggtctgaccctggacgaggcccagcgccaggtcatcgagtacatc
acccccttccttcccgagcatggaaaggcccatctggcagggaactcggtaggctccgac
aagaagttccttgaccggtacatgcccgacctgatggggttgctgcactacagggtcatc
gacgtcagcactttgaaggagttgtcgcgtcgctggtatccggatgtatacaggaacaag
ccggccaaacatggtggtcacagggccctggccgacatcatcgagtccatggacgaattg
cggtactaccgctccatgttcttcacgcccgctcccggcccggatgcggcccggtccaag
gacggggcggcggagatcgagcggaccagcctgcttcggcattacgaagagtccggcaac
ccgatcgaggacgctggcagtcccgagaagaccgactactga
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