Bacillus spizizenii: BIS30_04050
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Entry
BIS30_04050 CDS
T05513
Symbol
dnaE
Name
(GenBank) DNA polymerase III DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bit
Bacillus spizizenii
Pathway
bit03030
DNA replication
bit03430
Mismatch repair
bit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BIS30_04050 (dnaE)
03430 Mismatch repair
BIS30_04050 (dnaE)
03440 Homologous recombination
BIS30_04050 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bit03032
]
BIS30_04050 (dnaE)
03400 DNA repair and recombination proteins [BR:
bit03400
]
BIS30_04050 (dnaE)
Enzymes [BR:
bit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BIS30_04050 (dnaE)
DNA replication proteins [BR:
bit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BIS30_04050 (dnaE)
DNA repair and recombination proteins [BR:
bit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BIS30_04050 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
tRNA_anti_2
DNA_pol_IIIA_C
DUF3860-like
Motif
Other DBs
NCBI-ProteinID:
AJW84411
LinkDB
All DBs
Position
complement(732355..735702)
Genome browser
AA seq
1115 aa
AA seq
DB search
MSFVHLQVHSGYSLLNSAAAVEELVSEAERLGYASLALTDDHVMYGAIQFYKACKARGIN
PIIGLTASVFTDDNGLEAYPLVLLAKSNTGYQNLLKISSVLQSKSKGGLKPKWLHSYREG
IIAITPGEKGYIEMLLEEGLFEQAAQAALEFQSIFGKGAFYFSYQPFKGNQALSEQILRL
SEETGIPVTATGDVHYIRKEDKAAYRCLKAIKAGEKLTDAPAEDLPDLDLKPLEEMQNIY
REHPEALQESVEIAKQCRVDVSLGQTRLPSFPTPNGTSADDYLTDICMAGLRSRFGTPDE
RYLRRLQYELGVIKRMKFSDYFLIVWDFMKYAHDKGIVTGPGRGSAAGSLVAYVLYITDV
DPINHHLLFERFLNPERISMPDIDIDFPDTRRDEVIQYVQQKYGAMHVAQIITFGTLAAK
AALRDVGRVFGVSPKEADQLAKLIPARPGMTLDEARKQSPQLDKRLRESSLLQQVYMVAR
KIEGLPRHTSTHAAGVVLSEEPLTDVVPLQEGHEGIYLTQYAMDHLEDLGLLKMDFLGLR
NLTLIESITSMIEKEENIKIDLSSISYRDDKTFSLLSKGDTTGIFQLESAGMRSVLKRLK
PSGLEDIVAVNALYRPGPMENIPLFIDRKHGRAPVHYPHEDLRSILEDTYGVIVYQEQIM
VIASRMAGFSLGEADLLRRAVSKKKKDILDQERSHFVEGCLKKEYSVDTANEVYDLIVKF
ANYGFNRSHAVAYSMIGCQLAYLKAHYPLYFMCGLLTSVIGNEDKIAQYLYEAKGSGIRI
LPPSVNKSSYPFTVEDGAVRYSLRAIKSVGISAVKDIYKARKEKPFEDLFDFCFRVPSKS
VNRKTLEALIFSGAMDEFGQNRATLLASIDVALEHTELFAADDDQMGLFLDESFSIKPKY
VETEELPLVDLLAFEKETLGIYFSNHPLSAYRKQLAAHGAVSILQAQQAFKRQLSLGVLL
SKIKTIRTKTGQNMAFLTLSDETGEMEAVVFPEQFRQLSPVLREGALLFAAGKCEVRQDK
VQFIMSRAELLENMDAEKAPSVYIKIESSQHSQEILAKIKRILLEHKGETGVYLYYERQK
QTIKLPESFHINADHQVLYRLKELLGQKNVVLKQW
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgttcacctgcaagtgcatagcgggtacagcctgctaaacagcgccgcggct
gtggaagagctcgtcagtgaagctgagaggctcggatatgcgtctttggcgctgacagat
gatcatgtcatgtacggagctattcaattttataaagcatgcaaggcgagaggaattaac
ccgataatcggtttgacggcttctgtttttacagatgataacgggcttgaagcctacccg
ctcgtcctgctggccaaatcaaatacaggctatcaaaacctgctgaaaatcagcagcgtc
ctgcaatcgaaatcaaaaggcgggctaaagccgaaatggcttcacagttatcgagaaggc
attatcgcaataacgcccggcgaaaaaggatatattgaaatgctacttgaagaagggctg
tttgaacaggctgctcaagccgcacttgaatttcagtctatattcggaaagggagctttt
tatttctcctatcagccttttaaagggaatcaagccttgtctgagcagattctgcgtctg
tctgaagaaacgggtatccctgtaacggctacaggcgatgtgcattacataaggaaagaa
gataaggctgcctaccgctgtctgaaagcgattaaagcaggtgaaaaactgacggatgca
cccgccgaagaccttcctgatctcgatttgaaaccgctcgaagaaatgcaaaacatttat
cgagagcatcccgaagcactgcaagaatctgttgagatcgcgaaacaatgccgggttgat
gtcagcctcgggcagacccgtctcccgtctttcccgactccaaacggaacgtccgctgat
gattatttaacggacatctgtatggcaggactccgcagccgttttggcacgcctgatgaa
cgatatcttcgccgtcttcaatatgagcttggtgtcatcaagcggatgaaattcagcgat
tactttctgatcgtatgggattttatgaagtatgcccatgataaagggatcgtcacggga
ccgggaaggggttctgcggcaggctctcttgtggcttatgtgctgtatatcacagatgtt
gacccgattaatcatcatctgctgtttgaacgatttttaaatcccgaacgtatcagtatg
ccggatattgatattgacttcccggatacaagaagagatgaagtcatccaatacgttcag
cagaaatacggtgcgatgcatgttgcgcagattattacctttggaacacttgcagcaaaa
gcggcgcttcgggacgtcggcagagtattcggcgtaagcccgaaggaagcagatcagctt
gcaaaactcattcctgcaaggccgggcatgacactggatgaagcgagaaagcagtcgccg
cagctggataaaaggcttcgggagtcaagcctgcttcagcaagtctatatggttgctcga
aaaatagaagggctgccaaggcatacatcaacccacgcagcaggcgttgtcctgagtgaa
gaaccattaacagatgttgttcctcttcaggaagggcacgaagggatatatttgacgcaa
tacgcgatggatcatcttgaagacttgggccttttaaaaatggatttcttaggtttgcgg
aacctgactctgatcgagtccatcacttcaatgatcgaaaaagaagaaaacatcaaaata
gatctttcaagtatttcctaccgtgatgacaaaacgttctccttgctgtcaaaaggcgat
acgacagggatttttcaacttgaatctgcagggatgagaagcgtcttgaaacggcttaaa
ccttcaggcttggaagatattgtggcggtcaatgcgctgtaccggcccggtccgatggaa
aatattccgctatttatcgaccgtaaacatggtcgggcgcctgttcactatcctcatgaa
gatttaaggagcatcttggaagatacgtatggcgtcattgtgtatcaggagcaaattatg
gtgattgcttctcgtatggcaggattttctttaggcgaggcggacttgctcagacgtgca
gtcagcaaaaaaaagaaagacattcttgaccaagagcgaagccattttgttgaagggtgc
ttaaaaaaggagtattctgtagacactgcaaatgaagtctacgatttaatcgtcaaattc
gcaaactatggcttcaacagaagccatgctgtggcatacagcatgatcggctgccagctt
gcgtatttgaaggctcattatccgttatattttatgtgcggattgctgacaagcgtcatt
ggcaatgaggataaaatagctcaatatctttacgaagcaaaggggagcgggattcgtatc
cttcctccgtcagtgaacaaaagcagctatccgtttacagttgaagacggagctgtcagg
tacagcctccgtgcgataaaaagtgtaggcatctcagcagtcaaagatatatataaagca
agaaaagagaaaccatttgaagatcttttcgatttctgctttcgcgtgccgtcaaaaagc
gtaaatcgcaaaacgctagaagcactcatattttctggtgcgatggacgaattcggccaa
aaccgggccacgctgctcgcatccattgatgttgctttggaacatactgagctattcgcc
gcggacgatgaccaaatgggattgtttttagatgaatcgttttcaattaagccgaagtat
gtggagactgaggagcttccgcttgtggatttacttgcgtttgaaaaagagacgctcggc
atttatttttcaaatcatccgctctctgcctaccgaaaacagctggctgcgcacggggca
gtgtccattctgcaagcccagcaggctttcaaaaggcagctttctctcggagttctgctg
tcgaagatcaagacgattcggacgaaaacaggtcaaaacatggcgtttttaacgctcagt
gacgaaaccggcgaaatggaagccgtagtctttcctgaacaattcagacagctttctccc
gttttaagagaaggcgctcttttgttcgcggcgggaaaatgtgaagtaaggcaggataag
gtccaatttatcatgtcccgggcagaattattagaaaatatggatgcagaaaaagcgcca
tcggtttatataaaaatagaaagcagtcagcacagtcaggagatcctggcaaagattaag
cgcattttgctggagcataaaggggaaacaggcgtttatctctattatgaaaggcagaaa
cagacgattaagcttcctgagtcgtttcatatcaatgcggatcaccaggtgttatatcgc
ttaaaagagctgttgggtcaaaaaaacgtcgttttaaaacagtggtaa
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