Bos indicus (zebu cattle): 109553520
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Entry
109553520 CDS
T04792
Gene name
POLB
Definition
(RefSeq) DNA polymerase beta isoform X1
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03410
Base excision repair
biu05166
Human T-cell leukemia virus 1 infection
biu05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109553520 (POLB)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
109553520 (POLB)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
109553520 (POLB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
biu03400
]
109553520 (POLB)
Enzymes [BR:
biu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
109553520 (POLB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.-
109553520 (POLB)
DNA repair and recombination proteins [BR:
biu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
109553520 (POLB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
109553520 (POLB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
HHH_8
DNA_pol_B_thumb
HHH_5
Cdd1
HHH
HHH_2
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
109553520
NCBI-ProteinID:
XP_019809134
UniProt:
A0A6P5BHZ0
LinkDB
All DBs
Position
27
AA seq
335 aa
AA seq
DB search
MSKRKAPQETLNGGITDMLTELANFEKNVNQAIHKYNAYRKAASVIAKYPHKIKSGAEAK
KLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIK
TLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLSEVKKVDSEYIATVCGS
FRRGAESSGDMDVLLTHPSFTSESAKQPKLLHRVVEQLQKVRFITDTLSKGETKFMGVCQ
LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRP
LGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacggaaggcgccgcaggagactctcaacgggggcatcaccgacatgctcaca
gaactcgcaaactttgagaagaacgtgaaccaggctatccacaaatacaatgcctacaga
aaagcagcatctgtgatagcaaagtacccacacaaaataaagagtggagcggaagctaag
aaactgcctggagtaggaacaaaaattgctgaaaaaattgatgagtttttagctactgga
aaattgcgtaaactggaaaagattcggcaggatgatacgagttcatccatcaatttcctg
actcgagttagtggcattggtccatctgctgcaaggaagtttgtagatgaaggaattaag
acattagaagatctcagaaaaaatgaagataaattgaaccatcatcaacgaattgggcta
aaatattttgaggactttgagaaaagaattcctcgtgaagaaatgttacaaatgcaagat
attgtactaagtgaagttaaaaaagtggattctgaatacattgctacagtctgtggcagt
ttcagaagaggtgcagagtccagtggtgacatggatgtccttctcacccatccaagcttt
acctctgagtcagccaaacagcccaaactgttacatcgtgttgtggagcagttacaaaag
gtccgtttcattacagacactctgtcaaagggtgaaacaaagttcatgggtgtttgccag
cttcccagtaaaaacgatgaaaaggaatatccacacaggagaattgatatcaggttgata
cccaaggatcagtattactgcggtgtcctctatttcactgggagtgatattttcaataag
aatatgagagctcatgccctagaaaaaggcttcacaatcaatgaatacacaatccgtccc
ctgggtgtcactggcgttgccggggagcccctgcccgtggacagtgagaaggacatcttc
gactacatccagtggaaataccgtgagcccaaggaccgaagcgagtga
DBGET
integrated database retrieval system