Bos indicus (zebu cattle): 109554593
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Entry
109554593 CDS
T04792
Symbol
PRPF19
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03040
Spliceosome
biu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109554593 (PRPF19)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109554593 (PRPF19)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
biu03041
]
109554593 (PRPF19)
04121 Ubiquitin system [BR:
biu04121
]
109554593 (PRPF19)
03400 DNA repair and recombination proteins [BR:
biu03400
]
109554593 (PRPF19)
Enzymes [BR:
biu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109554593 (PRPF19)
Spliceosome [BR:
biu03041
]
Complex B
Other components
Prp19 complex
109554593 (PRPF19)
Complex C
Prp19-CDC5 complex
109554593 (PRPF19)
Ubiquitin system [BR:
biu04121
]
Ubiquitin ligases (E3)
U-box type E3
109554593 (PRPF19)
DNA repair and recombination proteins [BR:
biu03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
109554593 (PRPF19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Prp19
ANAPC4_WD40
NBCH_WD40
U-box
PROPPIN
eIF2A
Cytochrom_D1
RMC1_N
zf-Nse
Nup160
DUF1830
ATG16
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
109554593
NCBI-ProteinID:
XP_019810772
UniProt:
A0A6P5BDR9
LinkDB
All DBs
Position
29:complement(38971682..38981359)
Genome browser
AA seq
504 aa
AA seq
DB search
MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHP
IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVGAGEPMDLGELVGMTPEIIQKLQDKA
TVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTG
GADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQ
VVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHP
DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD
LRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLTTG
VAFGHHAKFIASTGMDRSLKFYSL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgatctgctctatctccaatgaagtgccagaacacccctgtgtgtcccccgtt
tctaatcatgtgtatgagcggcggctcattgagaagtatattgcagagaacggcacagat
cccatcaacaaccagcctctgtccgaggagcagctcattgatatcaaagttgctcaccca
atccggcccaagcctccctcagccaccagcatcccagccattctgaaagccttgcaggat
gagtgggatgcggtcatgctccacagcttcaccctgcgccagcagctgcagaccacccgc
caggagctgtcccacgccctgtaccagcacgatgccgcctgccgtgtcattgcgcgtctc
accaaggaagtcactgctgcccgagaagctctggcgaccctgaaacctcaggccggtctc
attgtgccccaggctgtgccaagctcccagccaagtgttgtgggtgcaggcgagccaatg
gatttgggcgaactggtgggaatgactcctgagattattcagaagcttcaagacaaggcc
accgtgctcaccacagaacggaagaagagagggaaaactgtgcctgaggagctggtgaag
ccagaagagctcagcaaataccgacaggtggcatcacatgtggggctgcacagtgctagc
attcccgggatcctcgccctggacctctgcccctccgacaccaacaagatcctcactggt
ggggcrgataagaatgtcgtcgtcttcgacaagagttctgagcagattttggccaccctc
aaaggccataccaagaaggtcaccagcgtggtctttcacccgtcccaggagctggtgttt
tctgcctcccctgatgctactatcaggatttggtcggttccgaacgcctcttgcgtacag
gttgttcgtgcccacgagagcgctgtgacaggcctcagcctccacgccactggtgactat
ctcctgagctcctctgatgaccagtactgggccttctctgacatccagacaggacgtgtg
ctcaccaaggtgactgatgagacctctggatgctctctcacctgtgcgcagttccaccct
gatggactcattttcgggacaggaaccatggactctcagatcaagatctgggacttgaag
gagcgcaccaatgtggccaacttccctggccactcgggccccatcaccagcattgccttc
tcggagaacggctactacctggctacagcggccgatgactcctctgttaaactctgggat
ctgcgcaaacttaagaactttaagacgttgcaactggataacaactttgaggtgaagtca
ctgatctttgaccagagcggtacttacctggcccttggcggcaccgatgtccagatctac
atctgtaaacagtggacggagattcttcactttacagagcacagtggcctgaccacaggg
gtggccttcggacaccaygccaagttcattgcttccacgggaatggaccggagcctcaaa
ttctacagcctgtag
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integrated database retrieval system
