KEGG   Bos indicus (zebu cattle): 109555305Help
Entry
109555305         CDS       T04792                                 

Gene name
SETDB1
Definition
(RefSeq) LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SETDB1
  KO
K11421  histone-lysine N-methyltransferase SETDB1 [EC:2.1.1.43]
Organism
biu  Bos indicus (zebu cattle)
Pathway
biu00310  Lysine degradation
biu04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:biu00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    109555305 (SETDB1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    109555305 (SETDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:biu03036]
    109555305 (SETDB1)
Enzymes [BR:biu01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     109555305 (SETDB1)
Chromosome and associated proteins [BR:biu03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     109555305 (SETDB1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    109555305 (SETDB1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: SET Pre-SET MBD DUF4537 Chromo
Motif
Other DBs
NCBI-GeneID: 109555305
NCBI-ProteinID: XP_019811643
LinkDB All DBs
Position
3
AA seq 1288 aa AA seqDB search
MSSLPGCLGLAAATAAVESEEIAELQQSVVEELGISMEELRQFIDEELEKMDCVQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDEASRPT
EIIEIPDEDDDVLSIDSGDAGNRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSNSQDL
HKGTLSQMPGELSKDGDLVVNMRILGKKRTKTWHKGTLIAIQTVGSGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTSTGTQFKPMEPPQPTAPPAPPAPPGPALSPQAGDSESLEG
QLAQSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENAPGGKPGINQTYRSPLGSTTSAPA
PPAPPAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRSEQYRGKNPLL
VPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFLEMFCLD
PYVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFINT
GPEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINPNSGYQYKRLEECLPTGVYEC
NKRCKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDF
ADKEGLEMGDEYFANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQEDGNSGTEDPRSP
XRQLRXHFCKDEDFSTSSVWRSYATRRQTXGPKENGLSEMSSKTLAPQTRAPTYPVPPSI
PVGGCNPXSSEETPKNKVASWLSCNSVSEGGFADSDSRSSFKTSEGGEGRTGGSRGEAEK
ASTSGLGFKDEGDIKQAKKEDPDDRNRMSIVTESSRNYGYNPSPVKPEGLRRPPSKTSMH
QSRRLMASAQPNPDDILTLSSSTESEGESGTSRKPTAGQTSAAAVDSDDIQTISSGSEGD
DFEDKKNMSGPMKRQVAVKSTRGFALKSTHGIAIKSTNMASVEKGESAPIRKNTRQFYDG
EESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTW
DYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq 3867 nt NT seq  +upstreamnt  +downstreamnt
atgtcctccctccctgggtgccttggtttggcagctgcaacagcagcagtggagtctgaa
gaaattgcagagctgcaacagtccgtggttgaggagctgggcatctcaatggaggagctt
cgacagttcattgatgaagaactggaaaagatggactgtgtacagcagcgcaagaagcaa
ctagcagagttggagacttgggtaatacaaaaggaatctgaggtggcccatgttgaccaa
ctctttgatgatgcatccagggcagtgactaactgtgagtctttggtgaaggacttttat
tccaaactgggactacagtaccgggacagcagctctgaagatgaagcttcccggcctaca
gaaataattgagattcctgatgaagacgatgatgtccttagtattgattcaggtgatgct
gggaacagaactccaaaagaccagaagctccgtgaagctatggctgccttaagaaaatcg
gctcaagatgtccagaagttcatggatgctgtcaacaagaagagtaattcccaggatcta
cacaaaggaaccttgagtcagatgcctggagaattgagcaaagatggtgacttggtcgtc
aacatgcgcatccttggcaaaaaaagaactaagacgtggcacaaaggcacccttattgcc
atccagacagttgggtcagggaagaagtacaaggtgaaatttgacaacaaaggaaagagt
cttctgtcaggaaaccacattgcctacgattaccaccctcctgctgacaagttgtatgtg
ggcagtcgagtagtggccaaatacaaagatgggaatcaggtctggctctatgctggcatt
gtagctgagacaccaaacgtcaaaaacaagctcaggtttctcattttctttgatgatggc
tatgcttcctatgtgacacagtctgaactgtatcccatttgccggccactgaaaaagact
tgggaggacatagaagacatctcctgccgagacttcatagaagagtatatcaccgcttac
cccaaccgccccatggtgttgctcaagagtggccagctgatcaagaccgagtgggaaggc
acgtggtggaagtcccgagtcgaggaggtggacggcagcctagtcaggatcctctttctg
gatgacaaaagatgtgaatggatctatcgaggctctacgcgactggagcccatgttcagc
atgaagacatcatccgcctctgcactagagaagaagcaagggggacagctcagaacacgt
ccaaatatgggtgctgtgagaagcaaaggtcctgtggtccagtacactcaggatctaaca
agtactggaacccagttcaagcctatggaacccccacagccgacagccccacctgcccca
cctgccccacctggtccagctctgtccccccaggcaggtgacagtgaaagcttggaaggc
cagcttgcccaatctcggaagcaggtagccaaaaaaagcacatctttccggccaggatct
gtgggctctggtcattcctcccctacatcccctgcactcagtgaaaatgcccctggtggg
aaacctgggatcaatcagacatataggtcacctttaggctccacaacctctgccccagca
cccccagctcccccagcacccccagccttccatggcatgctggagcgggcccctgcagag
ccctcctaccgtgcccccatggagaagcttttctacttacctcatgtctgcagctatact
tgtctgtctcgagtcagacctatgagaagtgagcagtatcggggcaagaaccctctgtta
gtcccactactctatgactttcggcgaatgacagcccggcgccgagtaaaccgcaagatg
ggctttcatgttatctataagacaccctgtggcctctgccttcggacaatgcaggagatt
gagcgttacctttttgagactggctgtgacttcctcttcctggagatgttctgtttggat
ccatatgttcttgtggaccgmaagtttcagccctataagcctttttactatattttggac
atcacctatgggaaggaagacgttcctctatcctgcgttaacgagattgacacgactccc
ccacctcaggtggcctacagcaaggaacggatcccgggcaagggtgttttcattaacaca
ggccctgartttcttgtcggctgtgactgcaaagatgggtgccgggacaagtccaagtgt
gcctgccatcagctaactatccaggctacagcctgcaccccaggaggccaaatcaacccc
aactctggctaccaatacaagagactagaagaatgtctgcccacaggagtttatgagtgt
aacaaacgctgcaaatgtgaccctaacatgtgcacaaaccggttggtacagcatggcctg
caggttcgtctgcagctcttcaagacccagaacaagggctggggtatccgttgcttggat
gacattgccaaaggctcctttgtctgtatttatgcagggaagatcctgacagatgacttt
gctgacaaggagggcctagaaatgggtgatgagtactttgccaatctggaccatattgag
agcgtggagaacttcaaggaggggtatgagagtgatgccccctgctcctctgacagcagt
ggtgtagacttgaaggaccaggaagacggcaacagtggtacagaggacccgaggagtcca
tgacgacagctcagatgacacttctgtaaggacgaggacttcagcaccagctcggtgtgg
cgcagctatgctacccgacggcagaccnncgggccaaaggaraatggattgtctgagatg
tcttccaagactctcgccccccagactagggcccccacatatcctgtccctccatcaatc
cctgtaggtggctgcaatccancttcctctgaagagacacctaagaacaaagtggcctcg
tggttgagctgcaacagtgtcagtgaaggtggctttgctgactctgatagccgttcatcc
ttcaagactagtgaaggtggggaaggccgcactgggggaagcagaggggaagctgagaag
gcttccacctcagggcttggcttcaaggatgagggagacatcaagcaggccaagaaagag
gaccctgatgaccgaaacaggatgtcaatagttactgaaagctctcgaaattatggttac
aatccttctcctgtgaagcctgaaggacttcgccgcccaccaagtaaaactagtatgcat
cagagccgacgactcatggcctctgctcagccaaaccctgatgatatcctgaccctgtcc
agcagcacagaaagtgagggggaaagtgggaccagccggaagcccactgctggccagact
tcagccgcagccgtggacagtgatgatatccagaccatctcctctggctctgaaggggat
gactttgaggacaagaagaacatgtctggtccaatgaagcgccaagtggcagtaaaatcc
acccggggttttgctttgaaatcaacccatggcattgccattaaatcaaccaacatggca
tctgtggaaaagggggagagtgcacccattcgtaagaacacacgccagttctatgatggg
gaggagtcttgctacatcatcgatgccaagcttgaaggcaacctgggccgctacctcaat
cacagttgcagccctaacctgtttgtccagaatgtcttcgtggatactcatgatctccgc
ttcccgtgggtggccttcttcgccagcaagagaatccgggctggcaccgagcttacctgg
gactacaactatgaggtgggcagcgtggaaggcaaggagttgctttgctgctgcggggcc
atcgaatgccgagggcgtcttctttag

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