Bos indicus (zebu cattle): 109557790
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Entry
109557790 CDS
T04792
Symbol
USP13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
biu01002
]
109557790 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
biu04121
]
109557790 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
biu04147
]
109557790 (USP13)
Enzymes [BR:
biu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109557790 (USP13)
Peptidases and inhibitors [BR:
biu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109557790 (USP13)
Ubiquitin system [BR:
biu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109557790 (USP13)
Exosome [BR:
biu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109557790 (USP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
UBA_3
Motif
Other DBs
NCBI-GeneID:
109557790
NCBI-ProteinID:
XP_019814884
UniProt:
A0A6P5BRA6
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Position
1:complement(89485325..89658458)
Genome browser
AA seq
863 aa
AA seq
DB search
MQRRGALFGMPGGSGSRKMAAGDIGELLVPHMPTIRVPRSGDRVYKNECAFSYDSPNSEG
GLYVCMNTFLAFGREHVERHFRKTGQSVYMHLKRHVREKVRGASGGALPKRRNSKMFLDL
DTDDDLNSDDYEYEDEAKLVIFPDHYEIALPNIEELPALVTIACDAVLSSKSPYRKQDPD
TWENELPVSKYANNLTQLDNGVRIPPSGWKCARCDLRENLWLNLTDGSVLCGKWFFDSSG
GNGHALEHYRDTGYPLAVKLGTITPDGADVYSFQEEEAVLDPHLAKHLAHFGIDMLHMHG
TENGLQDNDIKPRVSEWEVIQETGTKLKPMYGPGYTGLKNLGNSCYLSSVMQAIFSIPEF
QRAYVGNLPRIFDYSPLDPTQDFNTQMTKLGHGLLSGQYSKPPVKSELIEQVMKEEHKPQ
QNGISPRMFKAFVSKSHPEFSSNRQQDAQEFFLHLVNLVERNRIGSENPSDVFRFLVEER
IQCCQTRKVRYTERVDYLMQLPVAMEAATNKDELIAYELTRREAESNRRPLPELVRAKIP
FSACLQAFSEPENVDDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWVPKKFD
VSVDMPDLLDINHLRARGLQPGEEELPDISPPIVIPDDSKDRLMTQLIDPSDIDESSVMQ
LAEMGFPLEACRKAVYFTGNMGAEVAFNWIVVHMEEPDFAEPLTMPGYGGAASAGASVFG
ATGLDNQPPEETVAIITSMGFHRNQAIQALRATNSNLERALDWIFSHPEFEEDSDFVIEM
ENNANANIVSEAKPEGPRVKDGSGMYELFAFISHMGTSTMSGHYVCHIKKEGRWVIYNDH
KVCASERPPKDLGYMYFYRRIPS
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccggggcgccctgttcggcatgccgggcggtagcggcagcaggaagatggct
gcaggagacatcggcgagctgctagtgccccacatgcccacgatccgcgtgcccaggtcc
ggggacagggtctacaagaacgagtgcgccttctcctacgactccccgaattctgaaggc
ggactctatgtctgcatgaatacatttttggcctttggaagggaacacgtggaaagacac
tttcgaaaaactggacagagtgtctacatgcatctgaagagacacgtgcgcgagaaggta
agaggcgcatctggtggcgctttacccaaaaggaggaattccaagatgtttttagatcta
gatactgatgacgatttaaatagcgacgattatgaatatgaagatgaagccaaacttgtt
atattcccagaccactatgaaatagccctaccaaatattgaggagttaccagccctggta
accattgcttgtgatgcagttctcagctcaaaatctccatacagaaagcaggacccagat
acatgggagaatgaattgccagtgtcgaaatatgccaataaccttacccagttggacaat
ggagtcagaattcctccaagtggttggaagtgtgccaggtgcgaccttcgggagaacctc
tggttgaacctgaccgatggctccgtgctgtgtgggaagtggttctttgacagctctggg
ggcaacgggcatgcgttggagcattacagagacacaggctaccctctcgctgtgaaactg
gggaccatcactccggatggggccgatgtttattctttccaagaagaggaagctgttttg
gaccctcatttggccaagcacttagcacattttggaattgacatgcttcatatgcatggg
acagagaatgggctccaggacaacgacatcaagccgcgggtcagcgagtgggaggtgatc
caggagacggggacaaagctgaagcccatgtayggcccagggtacacagggctcaagaac
ctgggcaatagctgctatctcagctctgtgatgcaggccatcttcagcatcccagaattc
cagagagcgtatgtaggaaatcttccaagaatatttgactactctcctttagatccaaca
caagatttcaacacacagatgactaagttaggacatggccttctctcaggccagtattca
aaacctcccgtgaagtctgagctcattgaacaggtgatgaaggaggaacacaagcctcaa
cagaatgggatctctccacgcatgtttaaggcctttgtgagcaagagccacccggaattc
tcctccaayagacagcaggatgcccaggagtttttcctgcacctggtgaatctagtagag
aggaaccgcattggctcagaaaacccaagtgatgtttttcggtttttggtggaagagcgg
attcagtgctgtcagacccgaaaagtccgctacacggagagggtggactacctgatgcag
ttacctgtggccatggaggcagcaaccaacaaagatgaactgatcgcctatgaactaacg
agaagggaagcagaatcaaacagaagaccccttcccgagttggttcgtgccaagatacca
ttcagtgcctgcctgcaggccttttctgaaccagaaaatgttgatgatttctggagcagc
gccctgcaagcaaagtctgcgggtgtgaaaacatctcgctttgcctcattccctgaatac
ttggtagtgcagataaagaagttcacttttggtcttgactgggttcccaaaaaatttgat
gtttctgttgatatgccagacctacttgatatcaaccatctccgagccagggggttgcag
ccaggagaggaggaacttccagacatcagcccccccatagtgattcctgatgactctaaa
gatcgcctgatgacccaattgatagacccatcagatattgatgagtcttcggtgatgcag
ctggctgagatgggcttccctctagaagcatgtcggaaggctgtgtattttactggaaat
atgggagccgaggtggccttcaactggatcgttgttcacatggaagagccagattttgct
gaaccgctgaccatgcctggttatggaggagcagcttctgctggggcctctgtttttggt
gctactggattggataaccaacctccggaagaaactgtagctatcattacctccatggga
ttccatcgaaatcaggctattcaggccctgcgagcaacgaatagtaacctggaaagagca
ctggattggatctttagccaccctgagtttgaggaggacagtgactttgtgatcgagatg
gagaataacgccaatgcgaacatcgtttctgaggccaaacctgaaggacctagagtcaag
gatggatctggaatgtatgaattatttgcgttcatcagtcacatgggaacgtctacaatg
agtggccactacgtttgtcacattaaaaaggaaggaagatgggtgatctacaatgaccac
aaagtttgtgcctcagaaaggccccctaaagacctgggctacatgtacttttaccgcagg
ataccaagctaa
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