Bos indicus (zebu cattle): 109560207 Help Entry 109560207         CDS       T04792                                  Gene name CCNA2 Definition (RefSeq) cyclin-A2   KO K06627   cyclin-A Organism biu  Bos indicus (zebu cattle) Pathway biu04110   Cell cycle biu04152   AMPK signaling pathway biu04218   Cellular senescence biu04914   Progesterone-mediated oocyte maturation biu05161   Hepatitis B biu05165   Human papillomavirus infection biu05166   Human T-cell leukemia virus 1 infection biu05169   Epstein-Barr virus infection biu05200   Pathways in cancer biu05202   Transcriptional misregulation in cancer biu05203   Viral carcinogenesis biu05221   Acute myeloid leukemia Brite KEGG Orthology (KO) [BR:biu00001]  09130 Environmental Information Processing   09132 Signal transduction    04152 AMPK signaling pathway     109560207 (CCNA2)  09140 Cellular Processes   09143 Cell growth and death    04110 Cell cycle     109560207 (CCNA2)    04218 Cellular senescence     109560207 (CCNA2)  09150 Organismal Systems   09152 Endocrine system    04914 Progesterone-mediated oocyte maturation     109560207 (CCNA2)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     109560207 (CCNA2)    05202 Transcriptional misregulation in cancer     109560207 (CCNA2)    05203 Viral carcinogenesis     109560207 (CCNA2)   09162 Cancer: specific types    05221 Acute myeloid leukemia     109560207 (CCNA2)   09172 Infectious disease: viral    05166 Human T-cell leukemia virus 1 infection     109560207 (CCNA2)    05161 Hepatitis B     109560207 (CCNA2)    05169 Epstein-Barr virus infection     109560207 (CCNA2)    05165 Human papillomavirus infection     109560207 (CCNA2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:biu03032]     109560207 (CCNA2)    03036 Chromosome and associated proteins [BR:biu03036]     109560207 (CCNA2) DNA replication proteins [BR:biu03032]  Eukaryotic type   DNA Replication Initiation Factors    CDK (cyclin dependent kinase)     109560207 (CCNA2) Chromosome and associated proteins [BR:biu03036]  Eukaryotic type   Centrosome formation and ciliogenesis proteins    Cyclins     109560207 (CCNA2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cyclin_N2 Cyclin_N Cyclin_C Motif Other DBs NCBI-GeneID:  109560207 NCBI-ProteinID:  XP_019817754 UniProt:  A0A6P5BWT7 LinkDB All DBs Position 6 AA seq 430 aa AA seqDB search MLGSSAHGPAAREAGSAVTLQQTAFQEDQENVNPEKAAPAQQPRTRAGLAVLRAGNSRGP APQRPKTRRVAPLKDLPINDEYVPVPPWKANNKQPAFTIHVDEAEEEIQKRPTESKKSES EDVLAFNSAVTLPGPRKPLAPLDYPMDGSFESPHTMEMSVVLEDEKPVSVNEVPDYHEDI HTYLREMEVKCKPKVGYMKKQPDITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYIDRF LSSMSVLRGKLQLVGTAAMLLASKFEEIYPPEVAEFVYITDDTYTKKQVLRMEHLVLKVL AFDLAAPTINQFLTQYFLHQQPANCKVESLAMFLGELSLIDADPYLKYLPSVIAAAAFHL ALYTVTGQSWPESLVQKTGYTLETLKPCLLDLHQTYLRAPQHAQQSIREKYKNSKYHGVS LLNPPETLNV NT seq 1293 nt NT seq  +upstreamnt  +downstreamnt atgttgggcagctccgcgcacgggcctgcggcccgcgaggcgggttcggcggtaacattg cagcagacggcgttccaggaggaccaggagaacgtcaatcccgagaaggcggcgcccgcc cagcagccccggacccgggctggactggcggtactgagggccggaaactcgcggggtcca gctccccagaggcctaagacgcgacgggttgcacctcttaaggatcttcctataaatgat gagtatgtccctgttcctccctggaaagcaaacaataaacagcctgcatttaccatacat gtggatgaagcagaagaagaaattcaaaagaggccaactgaatctaaaaaatcagaaagt gaagatgtcttggcctttaattcagctgttactttaccaggaccaagaaagccactggca cctcttgattacccaatggatggtagttttgagtctccacatactatggaaatgtcagtt gtattggaagatgaaaagccagtgagtgttaatgaagtaccagactaccatgaggacatt cacacgtaccttagggaaatggaggttaaatgtaagcctaaagtgggttacatgaagaaa cagccagacattactaacagtatgagggctatcctcgtggactggttagttgaagtagga gaagaatataaactgcagaacgagaccctgcatttggctgtgaactacattgataggttt ctttcatccatgtctgtgttgagaggaaaacttcaacttgtgggcactgctgctatgctt ttagcctcaaagtttgaagagatatacccgccagaagtagcagagtttgtatacattaca gatgacacttataccaagaaacaagttctaaggatggagcacctagtcttgaaagtcctg gcttttgacttagctgcaccaacaataaatcagtttcttacccagtactttttgcatcag cagcctgcaaactgcaaagttgaaagtttagcaatgtttttgggagagttaagtttgata gatgctgacccatatctaaagtatttgccgtcagttatcgctgcagcagcctttcattta gcactctacacagtcacaggacaaagctggcctgaatcattagtacagaagactggatat actctggaaactctaaagccttgtctcctggaccttcaccagacctacctcagagcacca cagcacgcacaacagtcaataagagagaagtacaaaaattcaaagtatcatggtgtttct ctcctcaacccaccagagacactaaatgtgtaa

Bos indicus (zebu cattle): 109566776 Help Entry 109566776         CDS       T04792                                  Gene name CCNA1 Definition (RefSeq) cyclin-A1   KO K06627   cyclin-A Organism biu  Bos indicus (zebu cattle) Pathway biu04110   Cell cycle biu04152   AMPK signaling pathway biu04218   Cellular senescence biu04914   Progesterone-mediated oocyte maturation biu05161   Hepatitis B biu05165   Human papillomavirus infection biu05166   Human T-cell leukemia virus 1 infection biu05169   Epstein-Barr virus infection biu05200   Pathways in cancer biu05202   Transcriptional misregulation in cancer biu05203   Viral carcinogenesis biu05221   Acute myeloid leukemia Brite KEGG Orthology (KO) [BR:biu00001]  09130 Environmental Information Processing   09132 Signal transduction    04152 AMPK signaling pathway     109566776 (CCNA1)  09140 Cellular Processes   09143 Cell growth and death    04110 Cell cycle     109566776 (CCNA1)    04218 Cellular senescence     109566776 (CCNA1)  09150 Organismal Systems   09152 Endocrine system    04914 Progesterone-mediated oocyte maturation     109566776 (CCNA1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     109566776 (CCNA1)    05202 Transcriptional misregulation in cancer     109566776 (CCNA1)    05203 Viral carcinogenesis     109566776 (CCNA1)   09162 Cancer: specific types    05221 Acute myeloid leukemia     109566776 (CCNA1)   09172 Infectious disease: viral    05166 Human T-cell leukemia virus 1 infection     109566776 (CCNA1)    05161 Hepatitis B     109566776 (CCNA1)    05169 Epstein-Barr virus infection     109566776 (CCNA1)    05165 Human papillomavirus infection     109566776 (CCNA1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:biu03032]     109566776 (CCNA1)    03036 Chromosome and associated proteins [BR:biu03036]     109566776 (CCNA1) DNA replication proteins [BR:biu03032]  Eukaryotic type   DNA Replication Initiation Factors    CDK (cyclin dependent kinase)     109566776 (CCNA1) Chromosome and associated proteins [BR:biu03036]  Eukaryotic type   Centrosome formation and ciliogenesis proteins    Cyclins     109566776 (CCNA1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cyclin_N Cyclin_C Cyclin_N2 Motif Other DBs NCBI-GeneID:  109566776 NCBI-ProteinID:  XP_019826953 UniProt:  A0A6P5CLE6 LinkDB All DBs Position 12 AA seq 421 aa AA seqDB search MHLSSSKSGVVLAPVSRGPDACQMITRGQLGQDPPQRTVLGVLTENGQYRRTCGQELTTL RCFSGSENVYPPAGKKALSDSRVQAPAKQGFDIYMDEPEQGNRDSCPGRKGMALEDAYEV DTSALKSDLHFLLDFNTVSPMLVDSSLHSQSEDASDFGTDVINVTEYAEEIHQYLREAEI RHRPKAHYMRKQPDITESMRTILVDWLAEVGEEYKLRAETLYLAVNFLDRFLSCMSVLRG KLQLVGTAAILLASKYEEIYPPEVDEFVYITDDTYTKRQLLRMEHLLLKVLAFDLTVPTT NQFLLQYLRRQGVCIRTENLAKYVAELSLLEADPFLKYLPSLIAAAAYCLANYTVNRHFW PETLATFTGYSLTEIVPCLSELHKTCLSIPHRPQQAIREKYKASKYMHVSLMEPPMVLPL Q NT seq 1266 nt NT seq  +upstreamnt  +downstreamnt atgcatctcagcagctccaagagtggagtagtgctggctccagtgtcccgaggtcctgat gcctgtcagatgataaccagaggccagttgggccaggatccgccacaaagaacagtacta ggagtgctaactgagaatgggcagtaccggaggacctgtggccaggagctcaccacactc aggtgtttctctggatcagaaaatgtctaccctccagctggaaagaaagcgctgtctgac agtagggttcaggcacctgccaagcaaggatttgacatctacatggatgagcctgaacag gggaacagagatagctgcccagggcgaaaggggatggcattagaggatgcgtatgaagta gacaccagcgcactcaagtcagaccttcacttcctgttggattttaacacagtttcccct atgctggtagattcatctctccactctcagtctgaagatgcatcagattttggtacagat gtgataaatgtgactgaatatgctgaagaaattcatcagtaccttagagaagctgaaatc agacacaggcccaaggcacactacatgaggaaacaaccagacatcacagaaagcatgcgg accattctggtggactggctggctgaggtcggagaagagtacaagctccgcgcagagacc ctctacctggctgtcaacttcctggacaggtttctttcctgcatgtctgttcttagaggg aaactgcagcttgtaggaacagcagctattctcctggcttcaaaatatgaagaaatatat ccacccgaagtagatgagtttgtctacataacggatgatacctacacaaaacgacaactg ctgagaatggaacacctgctgctgaaggtcctggcttttgatctgacagtgccaactacc aaccagttcctccttcagtacttaaggaggcaaggagtgtgcatcaggactgagaacctg gccaagtatgtagcagaactgagtctccttgaagctgacccgttcttgaaataccttcct tcactgatagctgcagctgcttattgcctggcaaactacactgtgaacaggcacttctgg ccagaaaccctcgccacatttacaggctattcattaactgaaatcgtgccttgcctgagt gagctacataaaacgtgcctcagtataccccatcgacctcagcaagcaatcagggagaag tacaaggcttcaaagtacatgcacgtgtctctcatggagccacccatggtgcttcctctg cagtga

Bos indicus (zebu cattle): 109568476 Help Entry 109568476         CDS       T04792                                  Gene name CCNE2 Definition (RefSeq) G1/S-specific cyclin-E2   KO K06626   G1/S-specific cyclin-E1 Organism biu  Bos indicus (zebu cattle) Pathway biu04110   Cell cycle biu04114   Oocyte meiosis biu04115   p53 signaling pathway biu04151   PI3K-Akt signaling pathway biu04218   Cellular senescence biu04934   Cushing syndrome biu05161   Hepatitis B biu05162   Measles biu05165   Human papillomavirus infection biu05166   Human T-cell leukemia virus 1 infection biu05169   Epstein-Barr virus infection biu05200   Pathways in cancer biu05203   Viral carcinogenesis biu05206   MicroRNAs in cancer biu05215   Prostate cancer biu05222   Small cell lung cancer biu05226   Gastric cancer Brite KEGG Orthology (KO) [BR:biu00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     109568476 (CCNE2)  09140 Cellular Processes   09143 Cell growth and death    04110 Cell cycle     109568476 (CCNE2)    04114 Oocyte meiosis     109568476 (CCNE2)    04115 p53 signaling pathway     109568476 (CCNE2)    04218 Cellular senescence     109568476 (CCNE2)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     109568476 (CCNE2)    05206 MicroRNAs in cancer     109568476 (CCNE2)    05203 Viral carcinogenesis     109568476 (CCNE2)   09162 Cancer: specific types    05226 Gastric cancer     109568476 (CCNE2)    05215 Prostate cancer     109568476 (CCNE2)    05222 Small cell lung cancer     109568476 (CCNE2)   09167 Endocrine and metabolic disease    04934 Cushing syndrome     109568476 (CCNE2)   09172 Infectious disease: viral    05166 Human T-cell leukemia virus 1 infection     109568476 (CCNE2)    05161 Hepatitis B     109568476 (CCNE2)    05162 Measles     109568476 (CCNE2)    05169 Epstein-Barr virus infection     109568476 (CCNE2)    05165 Human papillomavirus infection     109568476 (CCNE2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:biu03032]     109568476 (CCNE2)    03036 Chromosome and associated proteins [BR:biu03036]     109568476 (CCNE2) DNA replication proteins [BR:biu03032]  Eukaryotic type   DNA Replication Initiation Factors    CDK (cyclin dependent kinase)     109568476 (CCNE2) Chromosome and associated proteins [BR:biu03036]  Eukaryotic type   Centrosome formation and ciliogenesis proteins    Cyclins     109568476 (CCNE2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cyclin_N Cyclin_C Motif Other DBs NCBI-GeneID:  109568476 NCBI-ProteinID:  XP_019829355 UniProt:  A0A6P5CUI0 LinkDB All DBs Position 14 AA seq 404 aa AA seqDB search MSRRSSRLQAKQQPQASQTDSPQEAQIIQAKKRKTAQDVKKRKEEVTKKHQYEIRNCWPP VLSGGISPCIIIETPHKEIGTSDFSRFTNYRFKNLFINPSPLPELSWGCSQDVWLNMLKK ETRYVHDKHFEVLHSELEPQMRSILLDWLLEVCEVYTLHRETFYLAQDFFDRFMLTQKDI NKNMLQLIGITSLFIASKLEEIYAPKLQEFAYVTDGACSEEDILRMELAILKALKWELCP VTVISWLNLFLQVDALKDAPKVLLPQYSQEKFIQIAQLLDLCILAIDSLEFQYRILAAAA LCHFTSIEVVKKASGLEWDNISECVDWMVPFVSVVKSTSPAKLKIFKKISMEDRHNIQTH TNYLAMLDEVNYVNTFRKEGQLSPVCNGGIMTPPKSTEKPPGKH NT seq 1215 nt NT seq  +upstreamnt  +downstreamnt atgtcaagacgcagtagccgtttacaagctaaacagcagccccaggccagtcagacggat tccccgcaagaagcccagataattcaggccaagaagaggaaaacggcccaggatgtcaaa aaaagaaaagaggaggtcaccaagaaacatcagtatgaaataaggaattgttggccgcct gtattatcaggggggatcagtccttgcattatcattgaaacaccccacaaagaaatagga acaagtgacttctccagatttacaaattacagatttaaaaatctttttattaatccttca cctttacctgaattaagctggggatgttcacaagatgtttggctaaacatgttaaaaaaa gagaccagatatgttcacgacaaacattttgaagttctgcattctgagttggaaccacag atgaggtcaatacttctagactggcttttagaggtatgtgaagtatacacacttcatagg gaaacattttatcttgcacaagacttttttgatagatttatgttgacacaaaaggatata aataaaaatatgcttcaactgattggaattacctcattattcattgcttccaaacttgag gaaatctacgctcctaagctccaagagtttgcttatgtcactgatggtgcttgcagtgaa gaggatatcttaaggatggaacttgctatattaaaggctttaaaatgggaactttgtcct gtaacggtcatctcctggctaaatcttttcctccaagttgatgctcttaaagatgctcct aaagttcttctacctcagtattctcaggaaaagttcattcaaattgctcagcttttagat ctgtgtattttagccatcgattcattagagttccagtacagaatactggctgctgctgcc ttatgccactttacctctattgaagtggttaagaaagcctcaggtttggaatgggacaac atttctgaatgtgtagactggatggtaccttttgtcagtgtagtaaaaagtactagccca gcgaagcttaagatttttaagaagatttctatggaagacagacacaacatacagacacat acaaattatctggctatgctggatgaagtaaattatgtaaacaccttcagaaaggaggga cagttgtcaccagtgtgcaatggaggcattatgacaccaccgaagagcactgaaaaacca ccaggaaaacactaa

Bos indicus (zebu cattle): 109572914 Help Entry 109572914         CDS       T04792                                  Gene name CCNE1 Definition (RefSeq) G1/S-specific cyclin-E1 isoform X1   KO K06626   G1/S-specific cyclin-E1 Organism biu  Bos indicus (zebu cattle) Pathway biu04110   Cell cycle biu04114   Oocyte meiosis biu04115   p53 signaling pathway biu04151   PI3K-Akt signaling pathway biu04218   Cellular senescence biu04934   Cushing syndrome biu05161   Hepatitis B biu05162   Measles biu05165   Human papillomavirus infection biu05166   Human T-cell leukemia virus 1 infection biu05169   Epstein-Barr virus infection biu05200   Pathways in cancer biu05203   Viral carcinogenesis biu05206   MicroRNAs in cancer biu05215   Prostate cancer biu05222   Small cell lung cancer biu05226   Gastric cancer Brite KEGG Orthology (KO) [BR:biu00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     109572914 (CCNE1)  09140 Cellular Processes   09143 Cell growth and death    04110 Cell cycle     109572914 (CCNE1)    04114 Oocyte meiosis     109572914 (CCNE1)    04115 p53 signaling pathway     109572914 (CCNE1)    04218 Cellular senescence     109572914 (CCNE1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     109572914 (CCNE1)    05206 MicroRNAs in cancer     109572914 (CCNE1)    05203 Viral carcinogenesis     109572914 (CCNE1)   09162 Cancer: specific types    05226 Gastric cancer     109572914 (CCNE1)    05215 Prostate cancer     109572914 (CCNE1)    05222 Small cell lung cancer     109572914 (CCNE1)   09167 Endocrine and metabolic disease    04934 Cushing syndrome     109572914 (CCNE1)   09172 Infectious disease: viral    05166 Human T-cell leukemia virus 1 infection     109572914 (CCNE1)    05161 Hepatitis B     109572914 (CCNE1)    05162 Measles     109572914 (CCNE1)    05169 Epstein-Barr virus infection     109572914 (CCNE1)    05165 Human papillomavirus infection     109572914 (CCNE1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:biu03032]     109572914 (CCNE1)    03036 Chromosome and associated proteins [BR:biu03036]     109572914 (CCNE1) DNA replication proteins [BR:biu03032]  Eukaryotic type   DNA Replication Initiation Factors    CDK (cyclin dependent kinase)     109572914 (CCNE1) Chromosome and associated proteins [BR:biu03036]  Eukaryotic type   Centrosome formation and ciliogenesis proteins    Cyclins     109572914 (CCNE1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cyclin_N Cyclin_C Motif Other DBs NCBI-GeneID:  109572914 NCBI-ProteinID:  XP_019835641 UniProt:  A0A6P5DBN5 LinkDB All DBs Position 18 AA seq 411 aa AA seqDB search MPREKERDAKEPDTMKEESGTDVSVRSRKRKANVAVFLQDPDEEIAKIDRTVRSQCGSQP WDSNRACENPCSLIPTPDKEEDELLYPHAAYKPQRSTPSSSRASPLPVLNWANREEVWKI MLNKEKTYLRDKHLMQRHPLLQPKMRAILLDWLMEVCEVYKLHRETFYLAQDFFDRYMAT QQNVVKTLLQLIGISSLFIAAKLEEIYPPKLHQFAYVTDGACSGDEILTMELIIMKALKW HLSPLTIVSWLNVYMQVAYLNDVYEVLLPQYPQQIFIQIAELLDLCVLDVGCLEFSYGVL AASALYHFSSSELMQKVSGYQWCDIEKCVKWMVPFAIVIRETGSSKLKHFRGVPAEDAHN IQTHINSLDLLDKAQAKKAILSEENRISPLPTGVLTPPQSSKKQSSGQGSA NT seq 1236 nt NT seq  +upstreamnt  +downstreamnt atgccgagggagaaggagagggatgcgaaggaaccggataccatgaaagaggaaagtggc accgatgtctctgttcgctccaggaaaagaaaggcaaatgtagccgtttttttgcaggat cccgatgaagaaattgccaaaattgacaggactgtgagaagccagtgtggcagtcagcct tgggacagtaatagagcctgtgaaaacccctgctccctgattcccacacctgacaaagaa gaagatgaacttctgtacccacacgctgcgtacaagcctcagaggagcacgccgtcgtca tccagagcgtcgccactgcctgtactgaactgggcaaatagagaggaagtatggaaaatc atgttaaacaaggaaaagacatacttgagggacaagcaccttatgcaacggcaccctctt ctgcagcctaaaatgcgagcaattcttctggattggttaatggaggtatgtgaagtctat aaacttcacagagagacattttacttggcacaggatttctttgatcggtatatggcaaca caacaaaatgttgtaaaaacacttttacaacttattgggatttcatctttatttattgct gccaaacttgaggaaatctatcctccaaagttgcaccagtttgcttatgttacagatggg gcttgttcaggagatgaaattctcaccatggaattaatcattatgaaggcccttaagtgg catttaagtcccctgaccattgtgtcctggttgaatgtatacatgcaggttgcatatcta aatgatgtttatgaagtgctcctgcctcagtatcctcagcaaatcttcatacagattgca gagcttttagatctctgtgtcctggatgtcgggtgcttagaattttcttatggtgtactt gctgcttccgccttgtatcatttctcttcatctgaactgatgcaaaaggtttcagggtat cagtggtgtgatatagagaagtgtgtcaagtggatggttccatttgccatagttataagg gagacaggaagttcaaaacttaagcacttcaggggagttcctgctgaagatgcacacaac atccagacccatataaacagcttggatttgctggacaaagcccaagcaaagaaagccata ttatctgaagaaaacaggatttctcctctccccactggagtcctcacccctccacagagc agtaagaagcagagcagygggcagggatcagcatga

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