Bos indicus (zebu cattle): 109563237 Help Entry 109563237         CDS       T04792                                  Gene name PTCH1 Definition (RefSeq) protein patched homolog 1   KO K06225   patched 1 Organism biu  Bos indicus (zebu cattle) Pathway biu04024   cAMP signaling pathway biu04340   Hedgehog signaling pathway biu04360   Axon guidance biu05200   Pathways in cancer biu05205   Proteoglycans in cancer biu05217   Basal cell carcinoma Brite KEGG Orthology (KO) [BR:biu00001]  09130 Environmental Information Processing   09132 Signal transduction    04340 Hedgehog signaling pathway     109563237 (PTCH1)    04024 cAMP signaling pathway     109563237 (PTCH1)  09150 Organismal Systems   09158 Development and regeneration    04360 Axon guidance     109563237 (PTCH1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     109563237 (PTCH1)    05205 Proteoglycans in cancer     109563237 (PTCH1)   09162 Cancer: specific types    05217 Basal cell carcinoma     109563237 (PTCH1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Patched Sterol-sensing Motif Other DBs NCBI-GeneID:  109563237 NCBI-ProteinID:  XP_019822097 UniProt:  A0A6P5CAD1 LinkDB All DBs Position 8 AA seq 1276 aa AA seqDB search MGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLKAANLETNVE ELWVEVGGRVSRELNYTXQKIGEEAMFNPQLMIQTPKEEGANVLTTEALRQHLDSALQAS RVHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTA YLLGKPPLQWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPA TAPNKNATKPLDMALVLNGGCHGLSRKYMHWQEELIVGGTVKNSTGKLVSAHALQTMFQL MTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRTYVEVVHQSVAQNSTQKVLSFTTTT LDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCSRSQGAVGLAGVLLVALSVAAGLG LCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGA SVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDR RLDIFCCFTSPCVSRVIQVEPQAYTETHDNTRYSPPPPYSSHGFAHETQITMQSTVQLRT EYDPHTHVYYTTAEPRSEISVQPVTMAQDTLSCQSPESTSSTRDLLSQFSDSSLHCLEPP CTRWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDIVPRETR EYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHKSFSNVKYVMLEENKQLPKMWLH YFRDWLQGLQDAFDSDWETGKIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQLTKRR LVDADGIINPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRIPAA EPIEYAQFPFYLNGLRDTSDFVEAIEKVRTICNNYTSLGLSSYPNGYPFLFWEQYIGLRH WLLLSISVVLACTFLVCAVFLLNPWTAGIIVTVLALMTVELFGMMGLIGIKLSAVPVVIL IASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLMLAGSEFD FIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGPYPEVSPANGLNRLPTPSPEPPPSVVR FAVPAGHTNNGSDSSDSEYSSQTTVSGISEELRHYEAQQGAGGPAHQVIVEATENPVFAX STVVHPEPRHHPPSNPRQQSHLDSRTLPPGQPGQQPRRETPRECLRAPPYKPRRDAFEIS TEGHSGPSNRDRTGPR NT seq 3831 nt NT seq  +upstreamnt  +downstreamnt atggggaaagctactggccggaaagcgccgctgtggctgcgagcgaagtttcaaagactc ttatttaaactgggttgttacattcaaaaaaactgcggcaagttcttggttgtaggcctc ctcatatttggggccttcgctgtgggattaaaggcagctaatctcgagaccaacgtggag gagctgtgggtggaagttggtggacgagtaagtcgtgaattaaattatactygccagaag attggagaagaggctatgtttaatcctcaactcatgattcagacccccaaggaagaaggt gctaatgtcctgaccacagaagcgctccgacagcacctggactcggcgctccaggccagc cgggtccatgtatacatgtataacaggcagtggaaattggaacatttgtgttataaatct ggagaacttatcacagaaacaggttacatggatcagataatagagtatctttacccttgt ttaattattacacctttggactgcttctgggaaggggcgaagttacagtctgggacggca tacctactaggtaagcctcctttgcagtggacaaactttgaccctttggaattcctagaa gagttaaagaaaataaactatcaagtggacagctgggaggaaatgctgaataaggctgaa gttggtcatggttacatggaccggccctgcctcaatccagctgatccagactgtcccgcc acagcccccaacaaaaatgcaaccaaacctcttgatatggcccttgttttgaatggtggg tgtcatggattatccagaaagtatatgcactggcaggaggaactgattgtgggtggcaca gtcaagaacagcactgggaagcttgtcagtgcccatgctctgcagaccatgtttcagtta atgactcccaagcaaatgtatgaacacttcaagggttatgagtatgtctcgcacatcaac tggaacgaggacaaggcagcagccatcctggaggcttggcaaaggacgtacgtggaggtg gttcatcagagtgttgctcagaactccactcagaaggtgctttcctttaccacgacgacc ctggatgacatcctcaagtccttctctgatgtcagcgtcatccgagtggccagcggctat ttactgatgcttgcctatgcctgtttaaccatgctgcgctgggactgctccaggtcccag ggtgccgtggggctggctggcgtcctgttggttgcgctgtcagtggctgcaggattgggc ctgtgctcgctgatcgggatttcctttaacgctgcaacaactcaggttttgccgtttctc gctcttggtgttggtgtggatgatgtctttcttctggcgcatgcatttagtgaaacggga cagaataaaagaattccttttgaggacaggaccggggagtgcctcaagcgcacgggagcc agtgtggccctcacctccatcagcaacgtcacagccttcttcatggccgcgttgatccca attccygctctgcgggcgttctccctgcaggcggctgtagtagtggtgttcaattttgct atggttctgctgatttttcctgcaattctcagcatggatttgtatcgacgtgaggacagg agattggatattttctgctgtttcacaagcccctgtgtcagcagagtgattcaggttgaa ccccaggcctacacagagactcacgataacacccgctacagccccccacccccctacagc agccacggcttcgcccatgaaacccagatcaccatgcagtccacggtacagcttcgcaca gagtacgacccccacacgcacgtgtactacaccactgccgagccacgctccgagatctct gtgcagcccgtcaccatggctcaggacacactcagctgccagagccccgagagcaccagc tccacaagggacctgctctcccagttctcggactccagcctccactgcctggagcccccc tgcaccaggtggacrctttcatctttcgctgagaagcactatgctcctttcctcttaaaa ccaaaagccaaggtcgtggtgatcttccttttcctgggcctgctgggggtcagcctttat gggaccacccgagtgcgtgatgggctggatcttacagacattgtgcctcgggaaactaga gaatatgactttattgctgcacagttcaaatacttttctttctacaacatgtatatagtc actcagaaagcagattacccgaatatccagcacttactttatgaccttcataagagtttc agtaatgtgaagtatgtcatgctggaagaaaataaacagcttcccaaaatgtggctgcac tacttcagagactggctccaaggacttcaggatgcatttgacagtgactgggaaaccggg aaaatcatgccaaacaattacaaaaatggatcggatgatggggtccttgcctacaaactc ctggtacaaaccggcagccgtgataagcccattgacatcagtcagctgactaaacggcgc ctggtggatgcagacggcatcattaaccccagtgctttctacatctacctgactgcttgg gtcagcaacgaccctgtggcttatgccgcctcccaagccaacatccggcctcaccgtcct gagtgggttcatgacaaagcygactacatgccagaaaccaggctgagaatccccgcggca gagcccatcgaatatgctcagttccctttctacctcaacggcctgcgtgacacctcggac ttcgttgaagccatcgaaaaagtcagaaccatctgcaataactacacgagcctggggctc tccagctaccccaatggctaccccttcctcttctgggagcagtacattggcctccgccac tggctcctcctgtccatcagcgtggtgctggcctgcacgttcctcgtgtgcgccgtcttc ctcctgaacccctggacggccgggatcattgtgacagtcttggctttgatgacagttgag ctctttggcatgatgggcctcattggaatcaagctgagtgccgtgcctgtggtcatcttg attgcttccgtcggcattggagtggaattcactgttcatgtcgctctggcctttctaaca gccattggtgacaagaaccgcagggctgtgcttgccctggagcacatgtttgcgcctgtt ctcgatggtgccgtttccactctactgggagtgctgatgcttgcaggatctgaatttgat ttcattgtcaggtacttctttgctgtcctggcaatcctaacaatcctgggtgttctcaat ggactagttttgctgccagtccttttgtccttcttcggaccgtatcctgaggtgtctcca gccaatgggctgaaccggctgcccacaccttctcctgagccaccccccagcgtggtccgg tttgctgtgcccgccggtcacacaaacaacgggtctgattcctctgactcggagtacagt tctcagacgaccgtgtcaggcatcagtgaggagctgcggcactacgaggcccagcagggt gctgggggccctgcccaccaagtgatcgtggaagccacagaaaaccctgtcttcgcccrc tccactgtggtccatcctgaaccgaggcatcacccaccctcaaatcctcgacagcagtcc cacctggactcaaggaccctgccacctggacagccaggacagcagcccagaagagaaacc cccagagaatgcttgagggcgcctccatataaaccgcgcagagacgctttcgaaatttct actgaagggcattctggccctagcaatagggaccgcacgggcccccggtga

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