Bos indicus (zebu cattle): 109566128
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Entry
109566128 CDS
T04792
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
biu
Bos indicus (zebu cattle)
Pathway
biu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109566128 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
biu03021
]
109566128 (POLR1B)
Enzymes [BR:
biu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109566128 (POLR1B)
Transcription machinery [BR:
biu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
109566128 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
109566128
NCBI-ProteinID:
XP_019825806
UniProt:
A0A6P5CIH9
LinkDB
All DBs
Position
11:48022889..48044912
Genome browser
AA seq
1135 aa
AA seq
DB search
MDPGGRWRNLPSGPSLKHLTDPSYGIPREQQKPALQELTRAHVESFNYAVREGLSHAVQA
VPPFEFAFKDERICLTIVDAVISPPAVPKGSICKELNVYPAECRGRRSTYRGKLTADISW
SVNGISKGVIKQFLGYVPIMVKSKLCNLYNLPPKALIEHHEEAEEMGGYFIINGIEKVIR
MLIMPRRNFPIAMVRPKWKSRGPGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIY
RKELFFLPLGFALKALVSFSDYQIFQELIKGKEDDSFFRNSVSQMLRIVMEEGCSTQKQV
LNYLGERFRVKLSLPDWYPNEQAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFALAKGE
CMEENPDSLMNQEVLTPGQLFLMFLKEKLEAWLVSIKIAIDKKSQKTNVSLNSENLMKIF
SLGIDLTKPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFRCVHRGADFAK
MRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAICEVVTQSVYTASIPALLCNLGVT
PVDGTPHRPYSECYPVLLDGVMIGWADKEIAPGIADSLRHFKVLREKRIPPWMEVALIPM
TGKPSLYPGLYLFTTPCRLVRPVQNLELGKEELIGTMEQIFMNVAIFEDEVLAGVTTHQE
LFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTFQDRSDNKLYRLQTPQSP
LVRPYMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKSEFID
LSERIKQGDDSLVFGVKPGDPRVLQKLDNDGLPFIGAQLKYGDPYYSYLNLNTGEGFVMY
YKSKENCIVDNIKVCSNDTGTGKFKCVCITMRVPRNPTIGDKFASRHGQKGILSRLWPVE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFIFSEENSALE
YFGEMLKAAGYNYYGTERLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPL
LEKPPPSWSALRNRKYICALCNRSDTIDTISLPYVFRYFVAELAAMNIKVKLDIV
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggatcccggcggccggtggcgaaacctgcccagtgggcccagcctaaagcacttgacc
gacccctcttacgggatcccgcgggaacagcaaaagccagcgttgcaggagctgacgcgg
gcgcatgtcgagtctttcaactacgctgtgcgcgaagggctcagccacgcggtgcaggcc
gtccctccctttgaatttgctttcaaagatgagcggatctgtctcaccattgtggatgcc
gtcatcagccctccagccgttcccaaagggagcatctgcaaagagctcaacgtttatcca
gcagagtgccgaggccggaggagcacctaccggggaaagctgacagccgatatcagctgg
tcagtgaatggaatctcaaaaggagtcattaagcagtttctgggctacgttcccatcatg
gtgaaatccaagctttgcaacttatacaaccttcctccaaaagccctcattgagcaccat
gaggaagcagaggaaatgggaggctattttatcatcaatggcattgaaaaagtcatccga
atgttgattatgcctcgcagaaatttccccattgcaatggtaagaccaaagtggaaaagc
agagggcctggctacactcagtatggagtttcaatgcactgtgtgagagaggaacattcc
gctgtcaatatgaaccttcactacttggaaaatggcacggttatgttgaactttatttac
cggaaagaactgtttttccttcctttgggatttgcacttaaggcactcgtcagcttttcc
gattatcagatttttcaggagctcatcaaaggaaaggaggatgactctttctttaggaac
tcggtttctcagatgttaaggatcgtaatggaagagggatgttccacacaaaaacaggtc
cttaactatctgggggagcgcttcagagtgaaactcagccttcctgactggtacccgaac
gaacaagctgcagagtttctgttcaaccagtgtatctgtatccacctgaaatccaacact
gagaagttctatatgctttgtctcatgacccggaagctctttgctttagccaaaggagag
tgcatggaggagaatcctgacagtttaatgaaccaagaggttctaactcctggtcagctc
ttcctcatgtttctgaaggaaaaattggaagcttggttagtgtctattaaaatagctata
gacaagaagtctcagaagaccaatgtgtccttaaacagtgaaaatttgatgaagattttt
agtctgggaatagaccttacaaaaccatttgaataccttcttgctactggaaatctacgt
tctaaaacaggtcttggcttcctgcaagattctggactttgtgtcgtggctgacaagctg
aacttcatacgctatctctcccatttccgctgtgtgcacagaggggctgattttgctaaa
atgcggaccaccactgtgcgcaggctgctgccggagtcctggggcttcctttgtcccgtg
cacacccctgacggggagccctgtggactgatgaaccacttaaccgccatctgtgaggtc
gtcacacagtctgtgtacacagcatctattccggctctactctgcaacttgggggtcact
ccagttgacggaactccacatcggccgtacagtgagtgctaccctgtcctgctggacggt
gtcatgattggctgggccgataaggagattgcccctggcattgccgattctctccgacat
tttaaggtgttgagagaaaaaagaattcctccctggatggaggtggccctgatccccatg
acaggaaaaccaagtctgtacccaggattgtacctttttaccactccttgtcgactggtg
cggcctgtgcagaacttggaactaggcaaagaagaactgattggaactatggaacagatc
ttcatgaatgttgccatcttcgaggatgaggttctggctggggtcaccacgcaccaggag
ctcttccctcacagcctgctgagtgtgatcgccaacttcatccctttctcagatcacaac
cagagtccgagaaatatgtaccagtgccaaatgggtaagcagaccatgggctttccactt
ctcacttttcaagatcgatcagataataaactgtatcgtcttcagactccacagagccct
ttagtaagaccgtacatgtatgattattatgacatggataactacccaattgggacaaat
gccattgtcgctgttatctcktacactggctacgacatggaagatgccatgattgtgaat
aaggcctcttgggaacgaggctttgcccatgggagtgtctacaagtctgaattcatagat
ctgtctgaaagaattaaacaaggagatgatagtctggtctttggagtcaaacctggagac
ccacgggttctgcagaagttggacaatgatggattgccatttattggagcacaactgaag
tatggagatccatattacagctacctaaacctcaacaccggggaaggctttgtgatgtac
tataagagtaaagaaaactgtattgtggataacattaaagtgtgcagtaatgataccggc
actggcaagttcaagtgtgtgtgcatcacgatgcgagtgccccggaacccaacaattgga
gataagttcgccagtcgtcacgggcagaagggcatcttgagcaggctgtggccagtggag
gacatgccattcaccgagagcgggatggtccctgacattctgttcaacccccatggtttt
ccatcccgcatgaccataggcatgctgatcgagagcatggccggcaagtctgcagctctg
cacgggctctgccacgacgcgacccccttcatcttctcagaggagaactcagccctggaa
tactttggcgagatgctgaaggccgctggctacaactactatggcaccgagaggttgtac
agtggcattagtgggctggagctagaagcagacatcttcataggcgtggtgtactaccag
cgtttacgccacatggtctccgacaaattccaagtgaggaccacaggagcccgagacaaa
gtcactaaccagcctataggggggagaaacgtccagggtggaatccgttttggggagatg
gagcgggatgcccttttagctcacggtacatcttttctcctccatgaccgcctcttcaac
tgctcggatcggtcagtggcccacgtgtgtgtgaagtgtggcagtctgctttcccctctg
ttggagaagccgcccccatcgtggtctgccctgcgcaacagaaagtacatctgtgccctc
tgtaaccgcagtgacaccattgacaccatctccttgccttatgtctttcggtattttgta
gctgaactggcagctatgaacatcaaagtgaagctggacatcgtttaa
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