Bos indicus (zebu cattle): 109570159
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Entry
109570159 CDS
T04792
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
biu
Bos indicus (zebu cattle)
Brite
KEGG Orthology (KO) [BR:
biu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
biu03036
]
109570159 (CHD5)
Chromosome and associated proteins [BR:
biu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109570159 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
ResIII
HDA2-3
DEAD
PHD_2
HMG_box
AAA_22
Motif
Other DBs
NCBI-GeneID:
109570159
NCBI-ProteinID:
XP_019831508
UniProt:
A0A6P5D0E4
LinkDB
All DBs
Position
16:44363837..44429678
Genome browser
AA seq
2217 aa
AA seq
DB search
MGTTNQSSILALPPAGCETENSLTFLELALSMSVFTWQDGEGLGLGCALPPAPVDRPLLC
KMRGMALGAFSSCVILLPFAPKRTLPFPTPMELRDHTLYPPDILEEEDGGLEGFDDFFPE
EPVSLPKKKKSKKLKENRSKGKRKKKEASVPRVCCIQLVVTWGPDERDRSGRRIRRPELF
VSSGAYKLPFLPPEGPESPPGPAPPLSYTLLFITVAPQLCPHLLLLASWAPGSTGGDELS
LAFLDTGYSRPLPEALVRKEAGYLSSHDVGGGDVTPLLLFISIQVAPTQDHGHQPPCPRL
CEQEGLDEIGVQIGVDQARTVPVTAHCSFTWDMPLSAVLKLLVAASSHPYLCWVGSNDEL
SENEEDLEEKSEKPLREEPPFPPVGVEADVSGGVSEPKSSGQLMAEWGLDDVDYLFSEAD
YHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVA
AAVETVTIAPPLAISPQQAPQPVPIRKAKTKEGKGPGVRKKIKGSKDVKKKGKGRKVTGL
KFRFGGVGSKRKKGSSSEEDEREESDFDSASIHSSSMRSECSAALGKKSKRRRKKKRIDD
GDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQW
EPKDXDDDEDEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGE
WLCPRCTCPPLKGKVQRILHWRWTEPPAPFMVGLPGPDVDPGVPPPKPLEGIXEREFFVK
WAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPL
YAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDLPYDQCTWEIDEIDIPYY
DSLKQAYWGHRELMLGEDARLPKRLVKKGKKLKDDKQEKPPDTPIVDPTVKFDKQPWYID
STGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLV
SAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKE
VQIKFHVLLTSYEXITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLL
TGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKA
DVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCN
HPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLD
LLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADT
VIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVR
PGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMMSQGQRPATPIPDVQSSKGGALAASA
KKKHGSTPPGDNKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYV
VREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDA
SQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLAR
VGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRH
LCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPEGP
EGKKPGEVISSDPNTPVPASPAHLLPGPLGLPDKMEAPLGYMDEKEVGVQKPKKPPEIQA
LPTALDRVEGEDKQESSDGKERAREERLEEMEKAQPSPEQLLKEEVLPEKEKVLDKLELS
LIHSRGDSSDFRPDDTKAEEKEPVETQQNGDKEEDEEGKKEDKIGKFKFMFNIADGGFTE
LHTLWQNEERAAVSSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYMILNEPFKS
EIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPAMALNARLAEVEC
LAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQM
SERSILSRLTNRAGDPTIQQISSRPRDLALVQRSFPAEPRLPGPLPDPHRREKLPPF
NT seq
6654 nt
NT seq
+upstream
nt +downstream
nt
atggggaccaccaaccagagttctatcctggctctgccgcctgccggctgtgagactgag
aactccctcaccttcctggagttggctctctccatgtctgtgttcacctggcaggatggg
gaggggctgggactcgggtgtgccctgccgcctgctccagtggaccgacctctgctgtgc
aagatgcgggggatggctctgggtgctttttcttcctgtgtcatcttgctgccgtttgcc
cccaagaggaccctcccattccctacccccatggaactcagggatcataccctttatccc
cctgacatcctggaagaagaagatggtggccttgaaggcttcgatgactttttcccggag
gagcccgtgagcctccccaagaagaaaaagtccaagaagctcaaggagaacaggtccaaa
gggaagaggaagaagaaagaggcatctgtccctcgggtttgctgcatccagcttgttgtg
acttggggtcctgatgaacgtgatcgaagtgggagaagaataaggagacctgagctgttc
gtctcctcgggcgcatataaactgccctttctgcccccggaggggcctgagtctccgccg
ggcccagcgccacccctgtcctacactctgctcttcatcactgttgcacctcagctttgt
cctcacctcctgctcctggcatcctgggctcccggatcgacaggtggggatgagctttct
ctggccttcctggatacggggtacagcaggcccctccccgaggccctggtcaggaaggag
gcaggatatctgagttctcatgatgtgggtgggggggatgtcacccctttgctccttttc
atctccatccaggtggccccaacccaagaccatggccaccaacccccctgcccccggctg
tgtgagcaagagggcttggatgagattggggtgcagataggggtggaccaggcaagaact
gtgccggtcaccgctcactgctccttcacctgggatatgcctctgtccgcggtgctgaag
ctgctggtggctgcctcctcccatccttacctttgctgggttgggagcaatgacgagctg
tcggaaaatgaagaggatctggaagagaagtcggagaagcccctgcgtgaagagcctcct
ttcccaccagtgggtgtagaggcagatgtgtctgggggtgtgagtgagcccaagtcctcg
ggacagctcatggccgagtggggcctggacgacgtggactacctgttctccgaggccgac
taccacacgctgaccaactataaggccttcagccagttcctcagaccgctcatcgccaag
aagaacccgaagatccccatgtcaaagatgatgactgtcctgggtgccaaatggcgggag
ttcagtgccaacaaccccttcaagggcagctcggcggcagcagctgcagcggcagtggcc
gcggccgtggagacggtcaccatcgcgcctcccctggctatcagcccccagcaggcaccc
cagcctgtgcccatccgcaaggccaagaccaaagagggcaaggggcctggcgtgaggaag
aagatcaaaggctccaaggatgtgaagaaaaagggtaaagggagaaaggtgactgggctc
aagttccgcttcggaggggtcggcagcaagaggaagaaggggtcctcgagcgaggaggat
gagcgagaggagtcggacttcgacagcgccagcatccatagctcctccatgcgttccgag
tgctctgctgccctggggaagaagagcaagaggaggcgcaagaagaagagaatcgatgat
ggcgatggctatgagacggaccaccaggactactgtgaggtgtgccagcagggtggggag
atcattctgtgtgacacctgcccgagggcctaccacctcgtctgtctggatcccgagctg
gagaaagctcctgagggcaagtggagctgtccccactgtgagaaggaagggatccagtgg
gagccgaaggacgrcgacgacgacgaggacgagggcggctgcgaggaggaggaggacgac
cacatggagttctgccgcgtgtgcaaggacggcggcgagctgctctgctgcgacgcctgc
ccctcttcctaccacctgcactgcctcaacccgccgctgcccgagatcccaaacggtgaa
tggctctgcccgcgctgtacttgtcccccactgaagggcaaagtccagcggatcctgcac
tggcggtggacagagcccccagcccccttcatggtggggctgccggggcctgacgtggac
cctggtgtacccccgcccaagcccctggagggcatcycagagagagagttcttcgtcaag
tgggctgggctctcctactggcactgctcctgggtgaaggagctccagctggagctctac
cacacagtgatgtatcgcaactaccaaagaaagaacgacatggatgagccaccgcccttt
gactatggctctggcgacgaggacggcaagagcgagaagaggaagaacaaggaccctctc
tatgccaagatggaggagcgcttctaccgctacggcatcaagcccgagtggatgatgatc
caccgcatcctgaaccacagcttcgataaaaagggggacgtacattacctaatcaagtgg
aaagacctgccctacgaccagtgcacctgggagattgacgaaattgacatcccctactac
gacagcctgaagcaggcctactggggccacagggagctgatgctgggagaggatgccagg
ctgcccaagaggctggtcaagaagggcaagaagctgaaggatgacaaacaggagaagccc
ccggacacacccattgtggatcccacggtcaagtttgacaaacaaccatggtacattgac
tccacgggcggcacgctgcacccgtaccagctggagggccttaactggctgcgcttctcc
tgggcccagggcaccgacaccatcctggccgacgagatgggtctgggcaagactgtgcag
accatcgtcttcctctactccctgtacaaggaggggcactccaaagggccctacctggtc
agtgcgcccctatccaccatcatcaactgggaacgtgagttcgagatgtgggcccctgac
ttctacgtggtcacctacacgggggacaaggagagccgctccgtgatccgggagaacgag
ttttcctttgaggacaatgccattcggagtgggaagaaggtgttccggatgaagaaagaa
gtgcagatcaaattccacgtccttctcacctcctatgagcycatcaccatcgaccaggcc
atcctgggctccatcgagtgggcctgcctcgtggtggatgaggcccaccggctcaagaac
aaccagtccaagttctttagggtcttgaacagctacaagatcgattataagctgctgctg
acagggaccccccttcagaacaacctggaagaactgttccacctcctcaacttcctgact
ccagagaggttcaacaacctggagggcttcctggaggagtttgctgacatctccaaggaa
gaccagatcaagaagctgcacgacctgttggggccgcacatgctgaggcggctcaaggct
gatgtgttcaagaacatgccggcaaagactgagctgattgtccgcgtggagttgagccaa
atgcagaagaagtactacaagttcatcctcacgcggaacttcgaggcactgaactccaag
gggggtgggaaccaggtgtcactgcttaacatcatgatggacctgaagaagtgctgcaac
cacccctacctcttccctgtggctgctgtggaggcccccgtcctgcccaatggctcctat
gatggcagctctctggtcaagtcttcagggaagctcatgctgctacagaagatgctcaag
aaactgcgggatgaagggcaccgtgtgctcatcttctcccagatgaccaagatgctggac
ctcctggaggacttcctggagtatgagggctacaagtatgagcggattgacggtggcatc
acggggggccttcggcaagaagcaattgacagattcaatgcccctggggcccagcagttc
tgcttcctcctttcgacccgggcaggtggcctggggatcaacctggccacsgcagacacg
gtcatcatctacgactcggactggaacccgcacaatgacatccaggccttcagccgcgcc
caccgcattgggcagaacaagaaggtgatgatctaccgctttgtgacgcgggcctcagtg
gaggagcgcatcacrcaggtggccaagcgcaagatgatgctcacccacctggtggtgcga
cctggcctgggctccaagtctggctccatgaccaagcaggagctggatgacatcctcaaa
tttggcacrgaggagctcttcaaggatgacgtggagggcatgatgtctcagggccagaga
ccagccacgcccatccctgatgtccagtcctccaaagggggagccttggccgccagcgcc
aagaaaaagcatggcagcactccgccaggtgacaacaaggacgtggaggatagcagtgtg
atccactatgacgatgcggccatctccaagctgctggaccggaaccaggatgccacggac
gacacggagctccagaacatgaatgartatctgagctccttcaaggtggcgcagtacgtg
gtgcgcgaggaggatggcgtggaggargtggaacgggagatcatcaagcaggaggagaac
gtggaccccgactactgggagaagctgctgcggcaccactacgagcagcagcaggaggac
ctggcgcgcaacctgggcaagggcaagcgcatccgcaagcaggtcaactacaacgacgcc
tcccaggaggaccaggagtggcaggacgagctctcagacaaccaatctgaatattccatt
ggctctgaggatgaggacgaggactttgaggaaaggccggaagggcagagtggacggcga
caatccaggaggcagctgaagagcgacagggacaagcctctgccccctcttcttgcccga
gtcggyggcaacattgaggtgctaggcttcaatgcccgccagcggaaggcctttttgaac
gccatcatgcgctggggcatgcccccccaggatgccttcaactcccactggctggtgcgg
gaccttcgtgggaagagcgagaaggagtttagagcctatgtgtccctcttcatgcggcac
ctgtgtgagccgggggctgacggcgcrgagacctttgcggacggcgtgccccgtgagggc
ctctccaggcagcacgtgctcacgcgcatcggggtcatgtcactagttaggaagaaggtt
caggagtttgagcacgtcaacgggaagtacagcaccccrgatctgatccccgaggggccc
gagggcaagaagccrggcgaagtcatctcctcggatcccaacacaccagtgcccgccagc
cctgcccacctcctgcctggccctctgggcctgccagacaaaatggaagccccactaggc
tacatggatgagaaggaggtgggggtgcagaagccaaagaagcccccagaaatccaggcc
ytgccaactgccctggacagagtggagggagaggacaagcaggagagctcagatggcaag
gagagggcccgagaggagcgactggaggagatggagaaggcccagccctccccggagcag
ctgctgaaagaagaagtgcttcctgagaaggagaaggttctggacaagctggaactgagc
ttgattcacagcagaggcgacagcagtgacttcaggccagatgacaccaaagctgaggag
aaggagcctgttgagacccagcaaaatggtgacaaagaggaagatgaagaggggaagaaa
gaggacaagatcgggaaattcaagtttatgttcaacattgcagacgggggattcacagag
ctgcacacactgtggcagaacgaggagcgtgcggctgtgtcctcggggaaaatctacgac
atctggcaccggcgccacgactactggctgctggcgggcatcgtcacgcatggctatgcc
cgctggcaggacatccagaacgacccgagatacatgatcctcaatgagcccttcaagtct
gagatccacaagggcaactacttggagatgaagaacaagttcctggcccgcaggttcaag
ctgctggagcaggcgctggtcattgaggaacagctccggagggccgcatacctcaacatg
acccaggaccccaaccatcctgccatggccctcaacgcccgcctggccgaggtggagtgc
cttgcygagagccaccagcacctgtccaaggagtccctcgccgggaacaagcctgccaat
gctgtgctgcacaaggtcctgaaccagctggaggagctgctgagcgacatgaaggcggac
gtgacgcgcctcccctccatgctgtcccgcattcccccggtggccgcccgcctccagatg
tcggagcgcagcatcctgagccgcctgaccaaccgagccggcgaccccaccatccagcag
atatctagccggccccgagacctcgctctggtgcagcgctcctttccagcggagccacgc
ctgccgggccccctgcctgatccccacaggagagaaaagctgccgcctttctag
DBGET
integrated database retrieval system