KEGG   Bradyrhizobium diazoefficiens USDA 110: bll5087Help
Entry
bll5087           CDS       T00109                                 

Gene name
gatB
Definition
(RefSeq) aspartyl/glutamyl-tRNA amidotransferase subunit B
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
bja  Bradyrhizobium diazoefficiens USDA 110
Pathway
bja00970  Aminoacyl-tRNA biosynthesis
bja01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:bja00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    bll5087 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:bja03029]
    bll5087 (gatB)
Enzymes [BR:bja01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     bll5087 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     bll5087 (gatB)
Mitochondrial biogenesis [BR:bja03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    bll5087 (gatB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GatB_N GatB_Yqey
Motif
Other DBs
NCBI-GeneID: 1051781
NCBI-ProteinID: NP_771727
RhizoBase: bll5087
UniProt: Q89K31
LinkDB All DBs
Position
complement(5643419..5644897)
Genome map
AA seq 492 aa AA seqDB search
MSTATHKLLKGATGDWEMVIGMEIHAQVTSNSKLFSGASTAFGGEPNSHVSLVDVAMPGM
LPVINEECVRQAVRTGLGLNAKINLRSVFDRKNYFYPDLPQGYQISQYKSPVVGEGEVLV
ELDGGRSVTVGIERLHIEQDPGKMLHDQSPSLSLIDFNRCGVALMEIVSKPDIRDAEQAK
AYVTKLRSIMRYLGTCDGDMEKGNLRADVNVSVRKPGGPLGTRCEIKNMNSINFIGQAIE
YEARRQIEILEDGGQIEQETRRFDPDKGETRSMRSKEEAHDYRYFPDPDLLPLEFSQEFV
DELKAKLPELPDQKKTRFVADFGLSAYDASVLVAERESAVFYETVLDKLGDRARDGKMAA
NWVINELFGRLNKEGRDITGSPVTAEQLAAIIDLIGEGTISGKIAKDLFEIVWQEGGDPR
ALVESRGMKQVTDLSAIEKVVDDIIAANPDKAAQVKDKPQSLGWFVGQVMKASGGKANPQ
SVNELLKSKLGI
NT seq 1479 nt NT seq  +upstreamnt  +downstreamnt
atgagcacggccacgcacaagcttctcaaaggcgccaccggcgattgggagatggtcatc
ggcatggagatccacgcccaggtgacgtcgaactcaaagctgttctcgggcgcgtccacc
gcgttcggcggcgagccgaacagccacgtgtcgctggtcgatgttgcgatgccgggcatg
ctgcccgtcatcaacgaggaatgcgtcaggcaggctgtccggaccgggcttggtctcaac
gcaaagatcaatctgcgttcggtgttcgatcgcaaaaactatttctatccggacctgccg
cagggctaccagatcagccagtacaagtcgccggtggtgggcgaaggcgaggtgctggtc
gagctcgacggcggccgcagtgtcaccgtcggcatcgagcgcctgcatatcgagcaggat
cccggcaaaatgctgcacgaccagtcgccgtcgctgtccctcatcgacttcaaccgctgt
ggcgtggcgctgatggagattgtctcaaaaccggacatccgcgacgccgagcaggccaag
gcctatgtcaccaagctgcgctcgatcatgcgctacctcggcacctgtgacggcgacatg
gagaagggaaatctgcgcgccgacgtcaacgtctccgtgcgcaagcccggcgggccgctc
ggcacccgctgcgaaatcaagaacatgaactcgatcaacttcatcggccaggcgatcgag
tatgaagcgcggcgccagatcgagatcctcgaggacggtgggcagatcgagcaagagacg
cgccggttcgaccccgacaagggcgagacgcggtcgatgcggtcgaaggaagaggcgcac
gactaccgctacttccccgatcccgacctgctgccgctggagttcagccaggagttcgtc
gacgagctgaaggcgaagctgcccgagctgccggaccagaagaagacgcgcttcgtcgcc
gatttcggcctgtcagcttacgacgcgagcgtgctggtcgccgagcgcgagagcgcggtg
ttctacgagaccgtgctcgacaagctcggcgaccgcgcgcgcgacggcaagatggcggcg
aactgggtaatcaacgagctgttcggccgtctcaacaaggaaggccgggatattacgggc
tctcccgtcaccgccgagcagctggctgcgatcatcgatctgatcggcgagggcacgatc
tccggcaagatcgccaaggatctgttcgagatcgtctggcaggagggcggcgatccccgc
gcactggtcgaaagccgcggcatgaagcaggtcaccgacctctcggcgatcgagaaggtg
gtcgacgacatcatcgcggccaatcccgacaaggccgcgcaggtcaaggacaagccgcag
tcgctcggctggttcgtcggccaggtgatgaaggcgtcaggcggcaaggccaacccgcaa
agcgtcaacgagctgctcaagtccaagctcggcatctag

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