Bradyrhizobium diazoefficiens USDA 110: blr0618
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Entry
blr0618 CDS
T00109
Symbol
blr0618
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
bja
Bradyrhizobium diazoefficiens USDA 110
Pathway
bja03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
blr0618 (blr0618)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bja03400
]
blr0618 (blr0618)
Enzymes [BR:
bja01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
blr0618 (blr0618)
DNA repair and recombination proteins [BR:
bja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
blr0618 (blr0618)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
BAC45883
UniProt:
Q89WR0
LinkDB
All DBs
Position
662923..663738
Genome browser
AA seq
271 aa
AA seq
DB search
MRLSLTTWNINSVRLRIDLVAKFLKSARPDVLCLQETKCIDDAFPLKRFKRLGYEHVALN
GQKGYHGVAIVSRIPFESKDIRTFCDKVDSRHISVSFGTQANIAKPLVLHNFYVPAGGDI
PDPALNEKFDHKLRFLDEMTACEPLHPRGDDRHILVGDLNVAPHENDVWSHKQLLKVVSH
TPVETEKLKAALAAGEWVDVARERIPMSEKVYTWWSYRSADWTVGDRGRRLDHIWVSRAL
KDAVQDFKILRDARSWERPSDHVPVTVTLEV
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctttccctgacaacctggaacatcaattcggtgcggctgcgcatcgatctggtc
gcgaaattcctcaagagtgcgcggccggacgtgctgtgcctccaggagaccaagtgcatc
gacgatgcctttccgctgaagcgcttcaagcggctcggctatgagcacgtcgcgctgaac
gggcagaagggctatcacggcgtcgccatcgtctcgaggatcccgttcgagtccaaggac
atccgcaccttctgcgacaaggtggattcgcgccacatttctgtatctttcgggacgcag
gccaacatcgcaaagccgctggtgctgcataatttctacgtgccggccggcggcgacatt
cccgatccggcgctgaacgagaagttcgaccacaagctgcgcttcctcgacgagatgacg
gcgtgcgagccgctgcatccgcgcggcgatgaccgccacatcctggtcggcgatctcaat
gtcgccccgcacgagaacgacgtctggtcgcacaagcagcttctgaaagtggtctcgcac
acgcctgtcgaaaccgagaagctgaaggcggcactcgcggccggtgagtgggtcgacgtc
gcgcgcgagcgcattccgatgtcggagaaggtctacacgtggtggagctaccgttccgcc
gactggaccgtcggcgatcgcggccgcaggctcgaccacatctgggtctcgcgcgcgctg
aaggacgcggtccaggatttcaagattctccgcgacgcgcggagctgggagcgtccgtcg
gaccacgtgccggtgacggtgacgctggaggtgtga
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