Bacillus sp. JS: MY9_0107
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Entry
MY9_0107 CDS
T02027
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bjs
Bacillus sp. JS
Pathway
bjs03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bjs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MY9_0107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bjs03021
]
MY9_0107
03400 DNA repair and recombination proteins [BR:
bjs03400
]
MY9_0107
Enzymes [BR:
bjs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MY9_0107
Transcription machinery [BR:
bjs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MY9_0107
DNA repair and recombination proteins [BR:
bjs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MY9_0107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AFI26647
LinkDB
All DBs
Position
122042..125557
Genome browser
AA seq
1171 aa
AA seq
DB search
MLELPNLIEIQTSSYQWFLDEGLREMFQDISPIEDFTGNLSLEFIDYSLGEPKYPVEESK
ERDVTYSAPLRVKVRLINKETGEVKDQDVFMGDFPIMTDTGTFIINGAERVIVSQLVRSP
SVYFSGKVDKNGKKGFTATVIPNRGAWLEYETDAKDVVYVRIDRTRKLPVTVLLRALGFG
SDQEILDLIGENEYLRNTLDKDNTENSDKALLEIYERLRPGEPPTVENAKSLLDSRFFDP
KRYDLANVGRYKINKKLHIKNRLFNQRLAETLVDPETGEILAEKGQILDRRTLDKVLPYL
ENGIGFRKLYPNGGVVEDEVTLQSIKIFAPTDQEGEQVINVIGNAYIEEEIKNITPADII
SSISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMSIQDTNT
ITPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRERAGME
VRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAKVNRFGFIETPYRRVDPETGKVTGRID
YLTADEEDNYVVAQANARLDDEGAFIDDSIVARFRGENTVVSRNRVDYMDVSPKQVVSAA
TACIPFLENDDSNRALMGANMQRQAVPLMQPEAPFVGTGMEYVSGKDSGAAVICKHPGIV
ERVEAKNVWVRRYEEVDGQKVKGNLDKYSLLKFVRSNQGTCYNQRPIVSVGDEVVKGEIL
ADGPSMELGELALGRNVMVGFMTWDGYNYEDAIIMSERLVKDDVYTSIHIEEYESEARDT
KLGPEEITRDIPNVGEDALRNLDDRGIIRIGAEVKDGDLLVGKVTPKGVTELTAEERLLH
AIFGEKAREVRDTSLRVPHGGGGIIHDVKVFNREDGDELPPGVNQLVRVYIVQKRKISEG
DKMAGRHGNKGVISKILPEEDMPYLPDGTPIDIMLNPLGVPSRMNIGQVLELHMGMAARY
LGIHIASPVFDGAREEDVWETLEEAGMSRDAKTVLYDGRTGEPFDNRVSVGIMYMIKLAH
MVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEILTVKSDD
VVGRVKTYEAIVKGDNVPEPGVPESFKVLIKELQSLGMDVKILSGDEEEIEMRDLEDEED
AKQADGLALSGDEEPEETASADVERDVVTKE
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
gtgttagaattaccaaatctcattgaaattcaaacctcttcttatcagtggtttcttgat
gagggtcttagagagatgtttcaagacatatcaccaattgaggatttcactggtaacctc
tctcttgagttcattgattatagtttaggtgagcctaaatatcctgtagaggaatcaaaa
gaacgtgatgtgacttactcagctccgctaagagtgaaggttcgtttaattaacaaagaa
actggagaggtaaaagaccaagatgtcttcatgggtgatttccctattatgacagataca
ggtacttttatcattaacggtgcggaacgcgttatcgtttcccagcttgttcggtctcca
agtgtatatttcagtggtaaagtagacaagaacggtaaaaaaggttttaccgcaactgtc
attccaaaccgtggcgcatggttagaatacgaaactgatgcgaaagatgttgtttatgtc
cgcattgatcgcacacgtaagttgccggttacggttcttttgcgtgctctcggcttcggc
tccgatcaagagattcttgatctcataggagaaaacgaatacctgagaaatacgcttgat
aaagataacacagaaaacagcgacaaagcgttgcttgaaatttacgagcgtctccgtcct
ggagagccgcctacagtagaaaatgcgaaaagcttgcttgattctcgtttctttgatccg
aaacgatacgatcttgccaatgtaggacgctataaaattaataaaaaacttcatattaag
aatcgcctcttcaatcagagacttgctgaaacgctcgttgatcctgaaacaggagaaatc
cttgctgaaaaagggcagattcttgatagaagaacacttgataaagtactgccatactta
gaaaacggaatcggtttcagaaagctgtatccgaatggcggcgttgttgaagatgaagtg
actcttcaatccattaaaatctttgctccgactgatcaagaaggagaacaggttattaat
gtaatcggcaatgcttacattgaagaagagattaaaaacatcacgcctgctgatattatt
tcttcaatcagctacttcttcaacctgctgcacggagtaggcgacacagatgatatcgat
catcttggaaaccgccgtttacgttctgtaggcgagcttctccagaaccaattccgtatc
ggtttaagccgtatggagcgtgtggttcgtgagagaatgtcaattcaagatacgaataca
attacgcctcagcagctgatcaatattcgtcctgttattgcgtccataaaagagttcttt
ggaagctcacagctttctcaattcatggatcagacgaacccgcttgctgagttaacgcat
aagcgccgtctgtcagcattaggaccgggcggattgacacgtgagcgtgccggaatggaa
gtgcgtgacgttcactactcccactatggccgtatgtgtccgattgaaacgcctgagggc
ccgaacatcggtttgatcaactcactatcatcttatgcaaaagtaaaccgttttggcttt
attgaaacgccatatcgccgcgttgatcctgaaacagggaaggtaacgggcagaatcgat
tacttaactgctgatgaagaggataactatgttgtcgctcaagcaaacgctcgtcttgat
gacgaaggcgcctttattgatgacagcatcgtagctcgtttccgcggggagaacactgtt
gtttccagaaaccgtgtagactacatggatgtatcgcctaagcaggttgtatctgctgcg
acagcatgtatcccgttcttagaaaacgatgactccaaccgtgccctcatgggagcgaac
atgcagcgtcaggctgtgcctttgatgcagccagaagcgccattcgttggaactggtatg
gaatacgtatcaggaaaagactctggtgccgctgtaatttgtaaacaccctggtatcgtt
gaacgcgtagaagcgaaaaacgtttgggttcgacgttatgaagaagtagacggtcaaaaa
gtaaaaggaaacctggataaatacagcctgctgaaatttgtccgctctaaccaaggtacg
tgctacaaccagcgtccgatcgtaagtgtcggcgatgaagtggtaaaaggagaaatcctt
gctgacggtccttctatggagcttggtgaacttgcacttggccgtaacgtaatggtcggc
ttcatgacatgggatggttacaactatgaggatgccatcatcatgagtgaacgccttgta
aaggatgatgtttatacatctatccacattgaagaatacgaatcagaagcacgtgatacg
aaacttggacctgaagaaatcactcgcgatattccaaacgtcggtgaagatgcgcttcgc
aatcttgatgaccgcggaatcatccgtatcggggcagaagtaaaagacggagatcttctt
gttggtaaagtaacgcctaaaggcgtaactgaactgactgctgaagaacgcctgcttcac
gccatctttggcgagaaagcccgcgaggttcgtgatacttctcttcgtgtgcctcacggc
ggcggaggaattatccatgacgttaaagttttcaaccgtgaagacggagacgaacttcct
ccaggtgtgaaccagttagtacgcgtatatatcgttcagaaacgtaagatttctgaaggg
gataaaatggccggtcgtcacggtaacaaaggtgttatctctaagattcttcctgaagag
gatatgccttaccttcctgacggcacaccaattgatatcatgcttaacccgctgggcgta
ccatcacgtatgaacatcgggcaggtattggaacttcatatgggtatggccgctcgttac
ctcggcattcacattgcatctcctgtatttgacggagctcgagaagaggatgtctgggaa
acacttgaagaagccggcatgtctcgtgacgccaaaacagtgctttacgacggacgtact
ggagagccgtttgataaccgcgtatctgtcggtatcatgtatatgatcaaactggctcac
atggttgacgataaacttcatgcgcgttctacaggcccttactcacttgttacgcagcag
cctcttggcggtaaagctcaatttggcggacagcgtttcggtgagatggaggtttgggca
cttgaagcttacggtgcggcttacactcttcaagaaattctgactgttaagtctgatgac
gtggttgggcgtgtgaaaacatacgaagccatcgttaaaggcgacaatgttcctgaacca
ggtgttccggaatcattcaaagtgttaatcaaagaacttcaaagcttaggtatggatgtc
aaaatcctttctggtgatgaagaagaaatagaaatgagagatttagaagacgaagaagat
gcgaaacaagctgacggcctggcattatcaggtgatgaagagccggaagaaacagcatct
gcagacgttgaacgtgatgtagtaacaaaagaataa
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integrated database retrieval system
