Bacillus sp. JS: MY9_1289
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Entry
MY9_1289 CDS
T02027
Name
(GenBank) UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bjs
Bacillus sp. JS
Pathway
bjs03420
Nucleotide excision repair
bjs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bjs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MY9_1289
03430 Mismatch repair
MY9_1289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bjs03400
]
MY9_1289
Enzymes [BR:
bjs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MY9_1289
DNA repair and recombination proteins [BR:
bjs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MY9_1289
MMR (mismatch excision repair)
Other MMR factors
MY9_1289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AFI27827
LinkDB
All DBs
Position
complement(1301812..1304091)
Genome browser
AA seq
759 aa
AA seq
DB search
MKCARLNDRIIHLHTYSREHYQFLFEEGIKGHLFCSHCEKPVLLRLNIADPPEFIHRQPG
DFPACEEACAPKPAKEEKKEDDQESGVIRLPKGKAIAAEPSPAVTEWHRPRSIKPGTPFV
PKTIEPDTSLFPSVGLNTDQLKAVTETEGPLLVLAGAGSGKTRVLTARAAHMIEHLGISP
ENMLLVTFTTKAVAEMKERMANQYGLQQAKVRRLVTGTFHSLFYKILYHYDSAKWNGEHL
LKMEWQREQYIKKALYEEGIDEKEFPVDQALQQIGFWKNTYVPNERIPLKDEWEKQVYRL
YEHYERQKKEHSQFDFDDMASACYELFVERPDLLEQYQARFTYILIDEFQDINPVQYKIM
QMLASPEQNLCCVGDDDQSIYAFRGSNPSFILDFQKDYPGAKTIYLTANYRSTHPIVSSA
DIVVKKNKNRYAKTLEAARDDIQVPVLFYPYDEEEEATMVVSDIKEKIQNGASPEDFAVL
YRTNSGGRAIYERLHQSSIPYTADRGVQSFYSRRIVRQILAYLYASQNEDDTEAIKHLLP
ALFLKQSALNTLKALSITEDCSMIQALAKLPDLKPFQLDKIKKIVPFFASLRTMKPVEAI
TFAEGKMGFSEYLKKRGNEGNKLEKGSDDLRDIKVVAKKFKTIPDFLAHVDHMRAAEKNR
TDEHGVQLMTIHRSKGLEFKTVYVLGTVDGSIPHDFSLETARKGDEAALEEERRLLYVAM
TRAKQHLYLSCPANRRGKTANRSRFLYPLLQKARQPLHH
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatgcgcccgactgaatgatcgaattatacatttacatacatattcgagagaacat
tatcaattcctctttgaagaaggaataaaaggacatttattttgttctcattgcgaaaag
cccgttttgttacggcttaacatcgccgatccgccagagtttatccatcgccagccaggc
gatttcccggcatgtgaggaggcgtgtgctccgaagcccgccaaagaggaaaaaaaagaa
gatgatcaggaatctggtgtcattcgtttgcccaagggaaaagcgatcgccgctgagccg
tctccagctgtcacggaatggcaccgtccaagaagcattaaaccaggaacaccatttgtg
ccaaaaacaatagaacccgatacgagcctttttccgtctgtcggtttaaacacggatcag
ctgaaagctgtcacggaaacagaaggcccgctgcttgtgcttgcaggtgcggggagcgga
aaaacacgggtgctgacagcccgtgccgcccacatgatcgaacacttaggcatatcgccg
gaaaacatgctgcttgtcacctttacaacaaaagctgtcgctgaaatgaaagagcgtatg
gcgaaccagtacggattacagcaggcaaaagtcagaagactagtcacaggaacattccac
agtctgttttataaaatcttgtatcactatgattctgctaaatggaacggtgagcatctg
ctgaaaatggagtggcagcgggaacaatatatcaaaaaagcactctatgaagagggcatc
gatgagaaagagttcccagttgaccaagccctgcagcagatcggtttttggaaaaacact
tatgtcccaaatgaacgcatccctctaaaagatgagtgggaaaaacaagtttatcgttta
tatgaacattatgaacgccagaaaaaagaacatagccaatttgattttgatgacatggct
tcagcctgctatgaattgtttgtcgagcggcctgaccttctggaacaatatcaagctcgg
tttacgtatatcttaattgatgagtttcaggacattaatccggttcaatacaaaatcatg
caaatgctcgccagcccggagcaaaacctgtgctgtgtcggagacgatgaccagtccatc
tacgcatttcgcggcagcaatccgtctttcattcttgatttccaaaaggattatcccgga
gcgaagacgatctatttaactgcgaactacagatctacgcatccgatcgtctctagtgct
gacatcgtcgtgaaaaagaacaaaaacaggtatgccaaaacgcttgaagcggcccgagac
gacattcaggtccctgtgcttttttatccttacgacgaagaggaagaagccacaatggtc
gtttccgatatcaaagaaaaaattcaaaacggcgccagtccagaagactttgcggttctt
taccgcacaaacagcgggggccgcgctatctatgaaaggcttcatcaatcgtcaattccg
tatacagctgaccgcggcgtccaatcgttttatagcagacggatcgtccgtcagattctc
gcctacttgtatgcaagccaaaatgaggatgacactgaagcgattaagcacttgcttccc
gccttgtttttaaagcagtccgctttgaatacgctgaaggcgctctcgattaccgaagac
tgctcgatgattcaagcgctggccaaactgcctgatctgaagccgtttcagcttgacaaa
atcaagaaaatcgtaccgtttttcgcaagcctgcgcacgatgaagcctgtagaagccatc
acctttgcagaaggaaaaatgggcttctccgagtatctaaaaaaacggggcaatgagggc
aacaagctagaaaaaggctccgatgacctgcgtgatatcaaggtcgtcgccaagaagttc
aaaacgattcctgactttcttgcccacgtggatcatatgagggccgctgagaaaaacaga
acggatgaacatggcgttcagctgatgaccattcaccggtcaaaaggccttgaattcaaa
acagtctacgtgttaggcactgtagacggctcaattccgcacgatttctcattagaaacg
gcaagaaaaggagacgaggccgctcttgaggaggaaagacgccttttatatgtagcgatg
acacgggcgaaacagcatttatatttgtcttgccccgcaaacaggcgcggcaaaacagcc
aaccgctcaagatttttgtatcccctgctacagaaagcaagacagcccttgcatcattaa
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integrated database retrieval system