Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854: BBKW_1461
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Entry
BBKW_1461 CDS
T04223
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
bks
Bifidobacterium catenulatum subsp. kashiwanohense JCM 15439 = DSM 21854
Pathway
bks03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bks00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BBKW_1461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bks03400
]
BBKW_1461
DNA repair and recombination proteins [BR:
bks03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BBKW_1461
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BBKW_1461
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
RecO_N_2
Motif
Other DBs
NCBI-ProteinID:
BAQ29596
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Position
complement(1699568..1700296)
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AA seq
242 aa
AA seq
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MPLYQDEGVVLRTVKLGEADRIVTLLTRDHGKIRAVAKGVRRTKSRFGGRLEPFMRVSLL
IAEGRSLDVISQAESVSAYARDICTDFKAYTAANVICETADKLVVTEHERSVAQYRLVLG
ALNALSKHAHEAAAIGDSYVMRALAIAGWTPRLRACVVCGDPISADRTWFFSISAGGLMC
STDHIRESFDVSWNAICQLQALVDGDWGELDGTALFSETRQMVEKWGEYYLERPIRSMRL
LD
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgtatcaggacgagggcgtggtcttgcgcaccgtcaaacttggcgaagctgat
cgtatcgtcactttgctgacacgcgaccatggcaaaatccgtgccgtcgccaaaggtgtg
cgccgaaccaaatcgcgtttcggaggtcgtttggagcctttcatgcgtgtctcgttgctt
attgcggaggggcgttcgcttgatgtgatttcccaagccgagtcggtgtcggcgtatgcg
agagacatctgcaccgatttcaaggcgtataccgcagcgaatgtgatttgcgaaaccgct
gacaagctggtggtgacggagcatgagcgttccgtggcgcagtatcggctggtgttggga
gcattgaatgctctttctaagcatgcgcatgaggctgctgcgattggcgattcctacgtg
atgcgtgctcttgcgatcgctggttggacgccgcgtttgcgtgcctgcgtggtgtgcggg
gatccgatttctgctgatcgtacatggtttttctcgatttccgcgggcggactgatgtgt
tcgaccgatcatattcgtgaatcgtttgacgtttcgtggaatgcgatctgccagttgcag
gcgcttgtagatggcgattggggagagctggacggcacggcgttgttttcggaaacccgc
caaatggtggaaaaatggggtgaatactatttggaacgtccgattcgttccatgcgcttg
ctagattag
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