Blastochloris tepida: BLTE_11210
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Entry
BLTE_11210 CDS
T05837
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
blag
Blastochloris tepida
Pathway
blag03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
blag00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BLTE_11210 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blag03021
]
BLTE_11210 (rpoZ)
03400 DNA repair and recombination proteins [BR:
blag03400
]
BLTE_11210 (rpoZ)
Enzymes [BR:
blag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BLTE_11210 (rpoZ)
Transcription machinery [BR:
blag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BLTE_11210 (rpoZ)
DNA repair and recombination proteins [BR:
blag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BLTE_11210 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
BBF92436
UniProt:
A0A348FYQ3
LinkDB
All DBs
Position
1201713..1202105
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AA seq
130 aa
AA seq
DB search
MARVTVEDCIDKVENRFELVLLASHRARMVSAGAPILVSRDNDKNPVVALREIADQQIMP
GDLKEELIHSLQKFTEVDEPEAEAVPLIAGSAGMESDDSDVAMDRMTEEDLLRGLEGLVP
PQNNDDDERE
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgtcaccgtcgaggactgcatcgacaaggtcgagaaccgtttcgagctggtc
ctgctcgccagccaccgcgcccgcatggtctcggccggcgcaccgatcctggtcagccgc
gataacgacaagaacccggtggtggcgctgcgcgagatcgccgatcagcagatcatgccg
ggcgacctcaaggaagagctgatccactcgctgcagaagttcaccgaggtcgacgagccc
gaggccgaggccgtgccgctgatcgccggctccgccggcatggagtccgacgactccgac
gtggcgatggaccgcatgaccgaagaggacctgctgcgcgggctggaagggctggtgccg
ccgcagaacaatgacgacgacgagcgcgagtga
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