Blastochloris tepida: BLTE_17910
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Entry
BLTE_17910 CDS
T05837
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
blag
Blastochloris tepida
Pathway
blag03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
blag00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BLTE_17910 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blag03021
]
BLTE_17910 (rpoC)
03400 DNA repair and recombination proteins [BR:
blag03400
]
BLTE_17910 (rpoC)
Enzymes [BR:
blag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BLTE_17910 (rpoC)
Transcription machinery [BR:
blag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BLTE_17910 (rpoC)
DNA repair and recombination proteins [BR:
blag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BLTE_17910 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
BBF93106
UniProt:
A0A348G0M3
LinkDB
All DBs
Position
complement(1922692..1926882)
Genome browser
AA seq
1396 aa
AA seq
DB search
MNQEVLNLFGPQTPAPTFDQIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRIGMLMDMTLKDLERILYFEYYVVIEPGITTLKERQLLSEEDYLRAQEEFGEDSFTA
MIGAEAIREMLKALDLEKLTVEIRQEIQETTSELKPKKLAKRLKLIESFIESGNKPEWMI
LTAVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELKAPDIIIRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVG
PELKLHQCGLPKKMALELFKPFIYSRLDAKGLSATVKQAKKMVEKERPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLESQL
EARVLMMSTNNILHPANGSPIIVPSQDIVLGLYYLSLMRENEPGQGMAFATIGEIEHALA
AKAVTLHAKIKGRVPYIDENGVEGTRIVDTTPGRMLLGALLPRHPKTPFEVVNKLMTKKE
ISGAIDTVYRHCGQKETVIFCDRIMALGFYHAFRAGISFGKDDMVVPAKKWPIVEEARAA
VKEYEQQYNDGLITQGEKYNKVVDAWAKCTDRIAEEMMREIQSAKRDELTGREAQINSIY
MMAHSGARGSPAQMKQLAGMRGLMAKPSGEIIESPIISNFKEGLSVLEYFNSTHGARKGL
ADTALKTANSGYLTRRLVDVAQDCIINEVDCGTENGIKVRAIIDAGQVVASLASRVLGRT
TADDVMDPATGEVLIPRSTLIEESQVEKLVAANVQEVKIRSVLTCEAKTGVCGTCYGRDL
ARGTPVNMGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQINEQSFIESNFEGTVKFRNKA
VARNSDGELIATGRNMSVIIVDTDGSERAIHRIQYGSRLKVDEDEKIKRGARIAEWDPYT
RPVLTEAEGTVAFEDLVEGQSMAETLDESTGIAKRIVTDWRSANRGADLRPAIVIKGKDG
KIAKLPRGGDARYTLIPDSIIAVDPGAKVQAGDVLARVPLESAKTRDITGGLPRVAELFE
ARRPKDAAIIAEVSGTIRFGRDYKNKRRLTIEPNDPELEPIEYLIPKGKHIHLQDGDIVE
QGDFIVDGNPAPHDILAIKGVEELAAYLVNEIQEVYRLQGVNINDKHIEVIVRQMLQKVE
IDDAGETDLIQGEQVDLLELEEENEKAISAGKKPATGRPVLLGITKASLQTRSFISAASF
QETTRVLTEAAVAGKVDNLGGLKENVIVGRLIPAGTGAVMTRLREVARRRDDLIQTEREK
ETAPQIEPPASLPAAQ
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaggtcttgaacctgttcggcccgcagaccccggcgccgaccttcgaccaa
attcggatctcgatcgccagtcctgaaaagatcctgtcctggtcgtatggcgagatcaag
aagcccgagaccatcaactaccggaccttcaagcccgagcgcgacggcctgttctgcgcg
cgcatcttcgggccgatcaaggactacgagtgcttgtgcggcaagtacaagcgcatgaag
tacaagggcatcatctgcgagaagtgcggcgtcgaggtcacgctgtcgcgggtgcggcgc
gagcgcatgggccatatcgagctggccgcgccggtggcccacatctggttcctgaagtcg
ctgccgagccgcatcggcatgctgatggacatgacgctcaaggatctcgagcgcatcctg
tacttcgagtactacgtcgtcatcgagccgggcatcaccaccctgaaggagcgccagctc
ctctcggaggaggactatctgcgcgcccaggaggagttcggcgaggacagcttcaccgcg
atgatcggcgccgaagccatccgcgagatgctgaaggcgctcgaccttgagaagctcacg
gtcgagatccgccaggagatccaggagaccacctccgagctgaagcccaagaagctcgcc
aagcgtctcaagctgatcgagtcgttcatcgaatccggcaacaagccggaatggatgatc
ctcaccgccgtgccggtgatcccgccggatctgcggccgctggtgccgctcgacggcggc
cgcttcgcgacctccgacctcaacgacctctaccgccgcgtcatcaaccgcaacaaccgc
ctgaagcggctgatcgagctcaaggcgccggacatcatcatccgcaacgagaagcggatg
ctgcaggaggccgtcgacgcgctgttcgacaacggccgccgcggccgcgtcatcaccggc
gccaacaagcggccgctgaagtcgctgtccgacatgctcaagggcaagcagggccgcttc
cggcagaacctgctcggcaagcgcgtcgactattccggccgttcggtgatcgtggtcggc
ccggagctgaagctgcaccagtgcggcctgccgaagaagatggcgctggagctgttcaag
ccgttcatctattcgcgcctcgacgccaagggcctgtcggccaccgtcaagcaggccaag
aagatggtcgagaaggagcggccggaggtttgggacatcctcgatgaggtgatccgcgag
catccggtgctgctcaaccgcgcgccgacgctgcaccgcctgggcatccaggcgttcgag
ccgacgctgatcgagggcaaggccatccagcttcacccgctggtgtgctcggccttcaac
gccgacttcgacggcgaccagatggcggtgcacgtgccgctgtcgctcgagtcgcagctc
gaggcgcgcgtgctgatgatgtcgaccaacaacatcctgcacccggccaacggctcgccg
atcatcgtgccctcgcaggacatcgtgctcggcctctattatctcagcctgatgcgcgag
aacgagcccggccagggcatggcgttcgccaccatcggcgagatcgagcacgcgctcgcc
gccaaggcggtgacgctgcacgccaagatcaagggccgcgtgccgtacatcgacgagaac
ggcgtcgagggcacccgcatcgtcgacaccacgccgggccgcatgctgctcggcgcgctg
ctgccgcgccaccccaagactccgttcgaggtcgtcaacaagctgatgaccaagaaggag
atctcgggcgccatcgataccgtctaccgccactgcggccagaaggagacggtgatcttc
tgcgaccgcatcatggcgctgggcttctaccacgccttccgcgccggcatctcgttcggc
aaggacgacatggtggtgccggccaagaagtggccgatcgtcgaggaagcgcgcgctgcc
gtgaaggaatacgagcagcagtacaatgacggcctgatcacccagggcgagaagtacaac
aaggtggtcgacgcctgggccaagtgcaccgaccgcatcgccgaagagatgatgcgcgag
atccagtcggccaagcgcgacgagctgaccggccgcgaagcccagatcaactcgatctac
atgatggcccactcgggcgcccgcggctcgccggcgcagatgaagcagctcgccggcatg
cgcggcctgatggccaagccgtcgggcgagatcatcgagagcccgatcatctccaacttc
aaggagggcctctccgtgctcgagtacttcaactcgacgcacggcgcgcgcaagggcctc
gccgacaccgcgctcaagacggcgaactcgggttacctcacccgccgtctggtcgacgtg
gcgcaggactgcatcatcaatgaggtggactgcggcaccgagaacggcatcaaggtgcgg
gcgatcatcgacgccggccaggtggtggcgtcgctggccagccgcgtgctcggccgcacc
acggccgacgacgtgatggatccggccaccggcgaggtgctgatcccgcgctcgacgctg
atcgaggagtcgcaggtcgagaagctggtcgcggccaacgtccaggaggtcaagatccgc
tcggttctgacctgcgaggccaagaccggcgtgtgcggcacctgctacgggcgcgatctc
gcccgcggcacgcccgtcaacatgggcgaggcggtgggcgtcatcgccgcccagtcgatc
ggcgagccgggcacccagctcaccatgcgcaccttccacatcggcggcgcggcgcagatc
aacgagcagtccttcatcgagtcgaatttcgaaggcacggtgaagttccgcaacaaggcg
gtggcccgcaactcggatggcgagctgatcgccaccggccgcaacatgtcggtgatcatc
gtcgacaccgacggcagcgagcgggcgattcaccgcatccagtacggctcgcgcctgaag
gtcgacgaggacgagaagatcaagcgcggcgcccgcatcgccgagtgggatccctacacc
cgcccggtgctcaccgaggccgagggcacggtggcgttcgaggatcttgtcgaaggccag
tcgatggccgagacgctcgacgaatcgaccggcatcgccaagcgcatcgtgaccgactgg
cgcagcgccaatcgcggcgcggacctgcgcccggccatcgtgatcaagggcaaggacggc
aagatcgccaagctgccgcgcggcggcgacgcccgctacaccctgatcccggactcgatc
atcgcggtcgatccgggcgccaaggtgcaggccggcgacgtgctggcccgcgtgccgctg
gaaagcgccaagacccgcgacatcaccggcggtctgccgcgcgtcgcggaactgttcgag
gcgcgtcggccgaaggatgcggcgatcatcgccgaggtctccggcaccatccgcttcggg
cgcgactacaagaacaagcgccggctcaccatcgagccgaacgatcccgagctggagccg
atcgagtatctgatcccgaagggcaagcacatccaccttcaggacggcgacatcgtcgag
cagggcgacttcatcgtcgacggcaacccggcgccgcacgacatcctggcgatcaagggc
gtcgaggaactcgccgcctatctggtcaacgagatccaggaggtctaccggctccagggc
gtgaacatcaacgacaagcacatcgaggtgatcgtccgccagatgctgcagaaggtcgag
atcgacgacgccggcgagaccgatctgatccagggcgagcaggtcgatctgctcgagctg
gaagaggagaacgagaaggcgatctcggccggcaagaagccggcgaccgggcgcccggtg
ctgcttggcatcaccaaggcgtcgctgcagacccgctccttcatctccgcggcctcgttc
caggagacgacgcgcgtgctgaccgaggcggcggtggccggcaaggtcgacaatctcggc
ggcctcaaggagaacgtcatcgtcggccggctgatcccggccggcaccggcgcggtgatg
acccgcctgcgcgaggtggcgcgccgccgcgacgacctgatccagaccgagcgcgagaag
gagacggcgccccagatcgagccgccggcgagcctgccggccgcgcaatag
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