Burkholderia latens: WK25_10990
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Entry
WK25_10990 CDS
T04819
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
blat
Burkholderia latens
Pathway
blat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WK25_10990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blat03019
]
WK25_10990
03016 Transfer RNA biogenesis [BR:
blat03016
]
WK25_10990
Enzymes [BR:
blat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
WK25_10990
Messenger RNA biogenesis [BR:
blat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
WK25_10990
Transfer RNA biogenesis [BR:
blat03016
]
Prokaryotic type
tRNA degradation factors
WK25_10990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
KhpA-B_KH
Motif
Other DBs
NCBI-ProteinID:
AOK04930
UniProt:
A0A1B4NTC6
LinkDB
All DBs
Position
1:complement(2366747..2368891)
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AA seq
714 aa
AA seq
DB search
MSMFNKVVKEFQWGQHKVRLETGEVARQASGAVIVDVEDTVVLATVVGAKSAKPGQDFFP
LTVDYLEKTYSAGKIPGGFFRREGRPSEHETLTSRLIDRPLRPLFPEGFYNEVQVVIHVL
SVNPEIPADIPALIGASAALAVSGLPFNGPVGAARVAYIDNAYVLNPTRDQLKASRLDLV
VAGTERAVLMVESEADQLPEDVMLGAVVFGHEQMQIAIDAIHELVREGGKPEWDWQPAPK
NEALIARVTELAHADLLAAYQLRDKQARSTKLKEVYAATSAKLEEEALAAGTVAADKATV
GNILFDIEAKIVRSQILNGEPRIDGRDTRTVRPIEIRTGVLPRTHGSALFTRGETQALVV
ATLGTKGDEQIIDALEGEYRERFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALVK
CLPSADEFGYSIRVVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLILEGN
KFAVLTDILGDEDHLGDMDFKVAGTEHGVTALQMDIKIQGITKEIMQVALAQAKEGRMHI
LGKMTSAVSGANTQLSEFAPRMITIKINPEKIRDVIGKGGSVIRALTEETGTTIDISDDG
VVTIASTSSEGMAEAKKRIEQITAEIEVGQVYEGTVLKLLDFGAIVNLLPGKDGLLHISE
IVNERVKDINDYLKEGQQVKVKVIQTDEKGRVRLSAKALLNEAAAASQSDTPQQ
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgttcaacaaggtcgtgaaggaattccagtggggccagcacaaggtgcgcctc
gaaaccggtgaagtcgcccgtcaggcgagcggtgccgtgatcgtcgacgtggaagacacc
gtcgtgctggcaaccgtcgtcggcgcgaagtcggcgaagccgggtcaggatttcttcccg
ctgaccgtcgactacctcgaaaagacctactcggccggcaagatccccggcggcttcttc
cgtcgcgaaggccgcccgtcggaacacgagacgctgacgtcgcgcctgatcgaccgtccg
ctgcgcccgctgttcccggaaggcttctacaacgaagtccaggttgtgatccacgtgctg
tccgtgaacccggaaatcccggcggacatccccgcgctaatcggtgcatcggccgcgctc
gccgtgtcgggcctgccgttcaacggcccggtcggtgccgcgcgcgtcgcatacatcgac
aacgcgtacgtgctgaacccgacgcgtgaccagctcaaggcgtcgcgcctcgacctcgtc
gtcgcaggcacggaacgtgccgtgctgatggtcgaatcggaagccgaccaactgccggaa
gacgtgatgctgggcgcggtcgtgttcggccacgagcagatgcagatcgcgatcgacgcg
atccacgaactcgtgcgcgaaggcggcaagccggagtgggactggcaaccggcgccgaag
aacgaggcgctgatcgcacgcgtgacggaactggcgcacgccgacctgctcgcggcttac
cagctgcgcgacaagcaggcgcgctcgaccaagctgaaggaagtctacgcggcgacttcg
gcgaagctcgaggaagaagcgctggcggccggcacggttgcggccgacaaggccaccgtc
ggcaacatcctgttcgacatcgaagcgaagatcgtgcgttcgcagatcctgaacggcgag
ccgcgcatcgacggtcgcgacacgcgcaccgtgcgtccgatcgagatccgcaccggcgtg
ctgccgcgcacgcacggttccgcgctgttcacgcgcggcgaaacgcaggcgctcgtcgtc
gcgacgctcggcacgaagggtgacgaacagatcatcgacgcgctcgaaggcgaataccgc
gagcgcttcatgcttcactacaacatgcctccgttcgcaaccggcgaaacgggtcgcgtg
ggctcgccgaagcgccgcgaaatcggccatggccggctggccaagcgcgcgctggtcaag
tgcctgccgagcgccgacgaattcggctactcgatccgcgtcgtgtcggaaatcaccgag
tcgaacggttcgtcgtcgatggcatcggtgtgcggcggctgcctcgcgctgatggacgcc
ggcgtgccgatgaaggcgcacgtcgccggtatcgcaatgggcctgattctcgaaggcaac
aagtttgcggtgctgaccgacatccttggcgacgaagatcacctcggcgacatggacttc
aaggtggccggcacggagcacggcgtgacggcgctgcagatggacatcaagatccagggc
atcacgaaggaaatcatgcaggtcgcgctcgcgcaggcgaaggaaggccgcatgcacatc
ctcggcaagatgacttcggcggtctcgggcgcgaacacgcagctgtcggaattcgcaccg
cggatgatcacgatcaagatcaacccggaaaagatccgcgacgtgatcggcaagggcggt
tcggtgatccgtgcgctgacggaagaaaccggcacgaccatcgacatctcggacgacggc
gtcgtcacgatcgcgagcacgagcagcgaaggcatggccgaagcgaagaagcgcatcgag
cagatcacggccgagatcgaagttggccaggtatacgaaggcacggtgctcaagctgctc
gatttcggcgcgatcgtgaacctgctgccgggcaaggacggcttgctgcacatctcggaa
atcgtcaacgaacgcgtgaaggacatcaacgactacctgaaggaaggtcagcaggtgaag
gtcaaggtgatccagacggacgagaagggtcgcgtccgtctgtcggcgaaggcgctgctg
aacgaagcagcggcggcttcgcagtcggatacgccgcagcagtaa
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