Bifidobacterium longum subsp. infantis 157F: BLIF_1712
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Entry
BLIF_1712 CDS
T01420
Name
(GenBank) tRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
blf
Bifidobacterium longum subsp. infantis 157F
Brite
KEGG Orthology (KO) [BR:
blf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
blf03016
]
BLIF_1712
Enzymes [BR:
blf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BLIF_1712
Transfer RNA biogenesis [BR:
blf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BLIF_1712
Prokaryotic type
BLIF_1712
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BAJ71848
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All DBs
Position
complement(2002641..2003804)
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AA seq
387 aa
AA seq
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MLHTTPSGLLIIDKPQGVTSFDAVAAVRGALHIKKVGHAGTLDPMATGTLVIAFGHATRL
LNAIVAHDKTYEATIRLGLRTTTDDAEGEVLVDDEARSRWQTLSAQLTEGGQSGEPTALP
TASWQDLLTRTIATNFTGDIEQVPNTFSAIKINGQRAYDLAREGKDVELKPRPVTISEFT
VLDIRSGFVAGEQTAEPLREDANTGAIPALDVDVRISCSSGTYIRALARDLGKELGVGGY
LTRLRRTRVGRFALPDDASGLIAPEAMLDTRTHTVTAHTDQKTFTNREGQTVTRNKCVLD
TPEGLAGDERRNWLLDHALTMEQAARGAMPALDITPEEASELRFGRRIERTISEPTAAIV
PQTHDVAAIIERANAHQAKPVTVFPLA
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
gtgcttcatacaacccccagcggtctgctcatcatcgacaagccgcaaggcgtgaccagt
ttcgacgccgtcgccgccgtgcgcggcgcgttgcacatcaagaaggtcggtcacgccggc
acccttgaccccatggccactggcacgctggtcatcgccttcggccacgccacacgactg
ctcaacgccatcgtggcgcatgacaaaacctacgaggctaccatacgcctcggcctgcgc
accactaccgacgatgccgaaggcgaggtgcttgtcgatgatgaagcccgctcccgctgg
caaacgctatcagcgcagctgactgagggtggccagagcggcgaaccaacggcgttacca
actgcctcatggcaagacctgctcacacgcaccatcgccaccaatttcaccggcgatatc
gaacaagtccccaatacgttctccgccatcaaaatcaacggccagcgtgcctacgacttg
gctcgcgaaggcaaggatgtggaactcaaaccccgcccggtcaccatcagcgaattcacc
gtgctggatatccgcagcggattcgtagcaggggagcagaccgctgaaccattgcgggaa
gacgcgaacacgggagcgattcccgcacttgatgttgacgtgcggatcagctgttcatcg
ggcacctatatccgtgcgctcgcccgcgacctcggcaaagaacttggcgtcggcggatac
ctgacccgtttgcgccgtacgcgagtcggccgattcgcgttgccggacgatgccagcgga
cttatcgctcctgaggcgatgcttgacacgcgaacccataccgtcaccgcacataccgat
cagaagacgttcactaatcgggaagggcaaaccgtcacgcgcaacaagtgcgtattggac
actcctgaaggtcttgccggtgacgagcgccgcaactggctgcttgaccatgcccttacc
atggaacaggccgctcgaggtgcgatgccggcgcttgacatcactcctgaggaggccagc
gaattacgcttcggccgccgtattgagcgtacaatcagcgagcccactgccgccattgtg
ccgcaaacgcatgatgtggcggcgattatcgagcgtgcaaacgctcatcaggccaagccg
gtcaccgtattccccctcgcgtaa
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