Bacillus licheniformis ATCC 14580: BL00221
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Entry
BL00221 CDS
T00197
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bli
Bacillus licheniformis ATCC 14580
Pathway
bli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BL00221 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bli03019
]
BL00221 (deaD)
03009 Ribosome biogenesis [BR:
bli03009
]
BL00221 (deaD)
Enzymes [BR:
bli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BL00221 (deaD)
Messenger RNA biogenesis [BR:
bli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BL00221 (deaD)
Ribosome biogenesis [BR:
bli03009
]
Prokaryotic type
rRNA helicases
BL00221 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
AAA_30
Flavi_DEAD
Helicase_RecD
PTSIIA_gutA
Motif
Other DBs
NCBI-ProteinID:
AAU25655
UniProt:
Q65D30
LinkDB
All DBs
Position
complement(4056594..4058039)
Genome browser
AA seq
481 aa
AA seq
DB search
MSKASFRDYALSGDITKALDHLGYKEPTAVQSEVIPAVLKKRDVVVKSRTGSGKTAAFGI
PLCELTEWEENKPQALVLTPTRELAAQVKEDLTNIGRYKRIKAAAVYGKSSFERQKTELK
QKCHIVVGPPGRVLDHIEKGTLPLEKLKYLVIDEADEMLNMGFIDQVGAIIRHLPEERLT
MLFSATFPEDVEHLSLQYMKDPLKIEIKAGGTTTADIEHQLIIVNENDPFSLLVDLFIVE
NPDSCIVFCRTQEQVNELQWRLSVLGYPCEKIHGGMPQEDRFAVMNRFRRGAFRYLIATD
VAARGIDIENITHVINYELPLDQESYVHRTGRTGRAGSRGKAITLASAREKRMIADIEDY
IGFHIPIIEEPSKEEIARAKAAFQKKINRKPELKQDKSESLNKEIMRLYFNGGKKKKLRA
VDFVGTIAKIDGVSAEDIGIITIQEQGSFVEILNGKGPLVLDAMKNTTVKGKLLKVHKAR
K
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagccagttttagagactatgcattaagcggcgatattacgaaagcgctcgat
cacttaggatataaggagccgactgcggtgcagagcgaagtgattcccgcggtgcttaaa
aagcgggatgttgtggtgaaatcgcggacggggagcgggaagacggccgcgttcggaatt
ccgctttgcgagctgaccgaatgggaagagaacaaaccacaagccttggttttgacaccg
acgcgcgagcttgccgctcaggttaaggaggatttgacgaacatcggccgctataaaaga
ataaaagcagcggctgtttacgggaagtcatcctttgaacggcaaaaaacggagctcaag
caaaaatgccatatcgttgtcgggccgccgggccgcgtattggatcacattgaaaaagga
acccttccattagaaaaactgaaataccttgtcatcgatgaggccgatgaaatgctgaat
atgggatttatcgatcaagtgggagcaatcatccgccatttgcctgaagaacggctgaca
atgctgttttcagcaacttttccggaggatgtggagcatctatcccttcaatatatgaaa
gaccctttgaaaatcgagattaaagcaggcggtacgacaaccgcagacatcgagcatcaa
ctgatcattgtaaacgaaaatgatccattttcgcttttagtggatctgttcattgttgaa
aacccggacagctgcatcgtcttttgccgcacacaggagcaagtgaatgagttgcagtgg
cgcctatccgttttgggttatccgtgcgagaaaattcacggcggcatgcctcaggaggat
cgttttgccgtgatgaaccgtttcagacggggagcgttccgctatttaatcgcgacagat
gtggcggcaagaggcatcgacattgagaacatcacacatgtcatcaactatgagctgcca
ttagatcaagaaagctatgtgcatcgtaccggaagaacaggccgagccggcagccgggga
aaagcgattactcttgccagtgcgcgtgaaaagaggatgattgctgacattgaagactat
atcggttttcatattcctattattgaggagccgtcaaaagaagaaattgcacgggcaaaa
gcggcgtttcaaaagaaaatcaataggaagccggagcttaaacaggacaagagcgaatcg
ttaaataaggaaatcatgaggctctactttaacgggggaaaaaagaagaagcttagagct
gttgatttcgtcggaacgattgctaaaattgacggcgtctccgccgaggatatcgggatt
atcacgatccaggagcaaggttcattcgttgaaattttaaacggcaaaggtccgctcgtc
ttagatgcgatgaaaaacacgacagtgaaagggaaattgctgaaagtgcataaagcgagg
aaataa
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