KEGG   Bifidobacterium longum DJO10A: BLD_1962
Entry
BLD_1962          CDS       T00707                                 
Symbol
hsdR
Name
(GenBank) Type I site-specific restriction-modification system R subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
blj  Bifidobacterium longum DJO10A
Brite
KEGG Orthology (KO) [BR:blj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:blj02048]
    BLD_1962 (hsdR)
Enzymes [BR:blj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     BLD_1962 (hsdR)
Prokaryotic defense system [BR:blj02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   BLD_1962 (hsdR)
SSDB
Motif
Pfam: SWI2_SNF2 EcoR124_C ResIII HSDR_N DEAD DUF6610
Other DBs
NCBI-ProteinID: ACD99407
UniProt: B3DRM5
LinkDB
Position
2341549..2344836
AA seq 1095 aa
MIFDSESVFEDNVITVLKQHGWKDGVLRYPTEQDLLDNWKGILYRNNNDIDRLGKYPLTD
GEMAQIIEQIETLRTPLALNSFVNGRTVSITRDNKEDVAHFGKEISLYIYDRKEIAGGKS
TYQIAQQPVYPAKNKMLNSRRGDLVLLINGMPLIHIELKKSGIPVSQATNQIEKYTHEGV
FTGLFRLVQIFVAMNPDDAVYFANPGVDKFNPSYYFHWADYNNEPICGGQNPGKDEWKLF
IGGTSGTAGLLSIPMAHQLIGFYTIADSADGCLKVLRSYQYIAANAISDVVRKCDWEQRP
TTPGRPGGYVWHTTGSGKTMTSFKSAQLIADSHDADKVVFLMDRIELGTQSLKEYRSFAD
SETEVQGTENTGVLRDKLNSTNVNDTLIVTSIQKMSNVKAGERGVTQAWLDQLAARRIVF
IVDECHRSTFGDMLQDIRRSFPNALFFGFTGTPILDENQKKNSTTAMVFGRCLHRYSIAD
GIRDHNVLGFDPYMVTTYKDSEVRRAVALDKAKAESAEDALADSVKAKVFQHYMDKSEVP
MGPMVDGAGNRISGIEDFLGRDQYGIDSPHPSMVVSDILEQFPVLSHAGKFHAMLAASSI
PEAVNYYHLFKQQAPKLHVTALFDPNIDNNEGATDKEDALTEIITDYNEAFGKEFVIPTW
PAMKKDISSRLSHKSPYGGIATNRSQQLDLLIVVDQMLTGFDSKWVNTLYLDKIIDYESI
IQAFSRTNRLFGPDKPFGVIRYYRKPYTMHGFIEAAVKLYSGDRPLDLFVQKLPANVKSM
DTRYREILDVFSDSGESDLMQLPESVEARRKFAKEFVELNRYLEAAKVQGFDWSTTEYKV
DSTDTDDTNEDNDEHGESEVVRPQIDERTYLILAQRYKELFDGNSDRGSDPDDDVNDNPE
APYELDGYLTEIDTGLIDTDYMNANFDKWLKALKENSPELAEMSAQLHRSFAALSRDEQR
LAELFLHDVERGDVEVEAGMTLRDYITRYAAREKNEQVDKLVDRLGVNRSVVEEFLAKRI
DEANINEFGRFDALRSSLDVQRAKAFFEQHDHKALPVFKVRMRATNMLKRFVLMGGFDID
DTDNTDGQSETKNEH
NT seq 3288 nt   +upstreamnt  +downstreamnt
gtgatattcgatagcgaatcggtgttcgaggacaacgtcattaccgtgcttaagcagcat
ggatggaaggatggcgtcttgcgctatccaaccgaacaggatctgctcgacaattggaaa
ggcatcctgtaccgcaacaacaacgacatagacaggcttggcaaatacccgctgacagac
ggggaaatggcacagataatcgagcagattgagaccctacgaaccccgcttgcgctcaat
tcgttcgtcaatgggcgtaccgtgtccatcacgcgtgacaacaaagaagatgtggcgcat
ttcggcaaggaaatcagcctctacatctatgaccgcaaggaaatcgcaggcggcaaaagc
acctatcagattgctcagcaaccggtctatcccgccaagaacaagatgttgaactcgcgg
cgcggcgacctcgtgcttctcatcaatggcatgccattgattcatatcgagcttaagaaa
agtggcataccggtcagccaagcaaccaatcagattgaaaagtacacacacgaaggcgta
ttcaccggcctgttccgactcgtacagatttttgtagccatgaaccccgatgacgccgtc
tacttcgccaatccgggcgtagacaaattcaatccaagctattacttccattgggctgac
tacaacaacgagcctatctgcggcgggcaaaaccccggcaaagacgaatggaagctgttc
atcggcggtacttccggcactgcggggctgttgtccattcccatggcgcatcagctcatc
ggcttctacaccatcgccgactcggcagacggatgcctcaaggtgctgcgcagctaccag
tacatcgctgcgaacgccatctctgacgtggtgcgcaaatgcgattgggaacagcggcca
actactccgggacgaccaggcggctatgtatggcacactaccggttccggaaaaaccatg
accagcttcaaatcggcacaactcatagctgattcgcatgacgccgataaagtcgtgttc
cttatggaccgcatcgagctaggcacccaatcactgaaggaataccgcagttttgctgac
agtgagacggaagtacaaggtactgagaacaccggcgttttgcgggacaaactcaacagc
accaatgtcaacgacaccctgatcgtcacctcaatccagaagatgagcaacgtgaaagca
ggggagcggggcgtcacccaggcgtggctggatcagctggctgcacgacgtatcgttttt
attgtggacgaatgccatcgttccacattcggcgacatgttgcaggacatccgtcgttcc
ttcccgaatgcgctgttcttcggcttcaccggcacacccattctggatgagaaccaaaag
aagaattccaccactgccatggtattcggccgctgtttgcaccgatacagcattgccgac
ggcattcgcgaccataatgtgctcgggttcgacccgtacatggtgaccacgtacaaggat
tctgaagtcagacgtgccgtggctctcgacaaggcgaaggcggagagtgcggaagatgcg
ctcgccgactcggtcaaggccaaagtattccagcattacatggataagtctgaggtcccc
atgggtccgatggttgatggtgccgggaaccgcatcagtggcatcgaggatttcctggga
cgagaccaatatggtatcgactctccgcacccgagtatggtggtctcggacattcttgaa
cagttcccggtgctcagccatgcgggcaaattccatgcgatgctcgctgccagttccatt
cctgaagctgtcaactattatcacttgttcaagcagcaggcacccaagttgcatgtgacg
gcgttgttcgatcccaatatcgacaacaacgaaggagcgacagacaaagaggatgcgctg
accgaaatcatcaccgattacaacgaggcgttcggcaaagaattcgtcattcctacatgg
ccggcgatgaagaaggatatttcttcgcgactgtcgcacaagagtccgtatggtggtata
gcaacgaaccgcagccagcagcttgatttgctcattgtcgtagaccagatgctcactggg
ttcgactcgaaatgggtgaatacgctgtatctcgataagattatcgactacgaaagcatc
attcaggcgttcagtcgtacgaatcgtctgtttggcccagataagccgtttggcgtcatc
cgctattaccgtaagccgtacaccatgcatggtttcatcgaggcagctgtgaaactgtat
tcgggtgatcgaccgctcgacctgttcgtacagaaattgccagcgaatgtgaaatccatg
gatactcggtaccgtgagattctcgacgtattctcagacagcggagaatcggaccttatg
cagctgccggagtcggtagaggctagacgtaagtttgccaaggagttcgtggaactgaat
cggtaccttgaagcggcgaaagtgcagggctttgactggagcaccacggaatacaaggtc
gatagcacggatactgacgatacgaatgaggacaatgatgagcatggcgagtctgaagtg
gtgcgtcctcaaattgacgaacgtacgtacctcattcttgcgcaacgctataaagaactg
ttcgatggcaatagcgatcgcggtagtgacccagatgatgatgtgaacgataatcctgaa
gcgccatatgaactggatggttacctcaccgaaattgataccggactcatcgataccgat
tacatgaatgccaacttcgataaatggctgaaggcgctcaaggagaatagcccggagttg
gcagagatgtctgcgcagctgcaccggtcctttgccgcgctctcgcgggatgaacaacga
ctcgctgaactgttcctgcatgacgtggagcgtggcgacgtggaggtcgaagccggtatg
acgctacgtgattacatcacgcgctatgctgcacgcgagaagaatgagcaagtcgacaaa
ctggtcgatcgattgggtgtcaacagatcggtggtcgaggaattccttgccaaacgtata
gacgaggcgaacatcaacgagttcggacgtttcgatgcactgcgttcctcgcttgacgtg
caacgggcaaaagccttctttgagcagcatgatcacaaggcattgccggtgttcaaggtg
cgtatgcgcgccaccaatatgttgaagcgtttcgtactcatgggcggattcgacatcgat
gataccgacaatacggatggacaaagcgagacgaagaacgagcactag

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