KEGG   Bifidobacterium longum subsp. longum JCM 1217: BLLJ_1473
Entry
BLLJ_1473         CDS       T01419                                 
Name
(GenBank) primosome assembly protein PriA
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
blm  Bifidobacterium longum subsp. longum JCM 1217
Pathway
blm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:blm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BLLJ_1473
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:blm03400]
    BLLJ_1473
Enzymes [BR:blm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BLLJ_1473
DNA repair and recombination proteins [BR:blm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BLLJ_1473
SSDB
Motif
Pfam: PriA_3primeBD
Other DBs
NCBI-ProteinID: BAJ67140
LinkDB
Position
1745163..1747451
AA seq 762 aa
MTLAGLAPRKRRKRAPAEHTPAEQHPIAQVVLDVQALHLGQTFDYFIDEKDSEAAQPGVL
VRVRFGGQRVSGVIWARTDTSDTPRSSIRYIERVLSPDVLVPASMREDIGLVAKAYGGTR
ANILRFAVPPRVAKVETEQRLAASFRRPVGGSLPDNTQGGFAGRGTNPDGTKLAGSTFAV
ASTVSEGAAQGYRRLTANYADVNVLHDALTGQRFQSFVFDSLPGAQEWQRNMAWMVATAL
SAGKAAVVELPTMREVEDLMHMLRNYGLKPFAPAPAGGWVGDVAVLNAETMPAADRYRTY
LAVALGQVKVVIGTRAVMYAPVEGPALFAILEDAAYQNMDGMMPYPQARGVMRLRAKSHG
GVFVAMANARTPQSQWENTGPGTVETPVSGYSTTIHPLASPLKDATPWVRWLNRDELARL
ADPSIGARVPHTAVHVLSKALESGPVLLSIPQDSVSETLSCAKCHRQARCAKCSGPLQLP
ADRRDSTPRCRWCGAAAINWKCPGCGHERMRVVRVGAAGTAAELAGLFRGVPVVLSSKTQ
GLVRDVACQPMIVIATPGFEPRVRPVSAEQGSAGHEYRAVAVLDAWTSLYALGVDARLDT
LTAWMRAVSLCAPRSRGGQALILGETDPALAQSLMLWDSRILAAKDLEERVETGMPPAVA
AACVWGRRDAVMTLMQRIGALGGDWTACGELPGMLGPVPIAQPDTVDARELEATADRVKA
VIRVPQSRRAELAARLHRETARHVASREPGELRFRVDPKDLI
NT seq 2289 nt   +upstreamnt  +downstreamnt
ttgacgcttgcggggctggctccccgcaagcgtcgtaaacgtgcgcctgcggagcatacg
ccggccgagcagcatcccatagcgcaagtcgtgctggatgtgcaggcgctccacctcggt
cagacattcgattacttcattgatgaaaaagacagcgaggccgcacaaccgggtgtgctg
gtgcgcgtgcggtttggcggtcagagggtcagcggtgtgatttgggcacgcaccgatacc
agtgatacgccgcgctcttcgattcgctatatcgagcgagtgctaagccccgatgtactg
gttcccgcttcgatgcgcgaggatatcggtctggttgccaaagcctatggcggcacacgg
gccaatattctgcgtttcgccgtgccaccgcgcgtggccaaggtggagaccgagcagcgg
ttggccgcgtcgttccgtcggccggtcggcggctcattgccggataatacgcaaggcggt
tttgccgggcgtggcaccaatcccgatgggaccaaacttgctggctctacctttgccgtt
gctagcaccgtttcggagggagctgcgcaggggtatcgtcgtctgaccgccaattacgcc
gatgtcaatgtgcttcatgacgcgcttaccggtcaacgtttccaatcttttgtgtttgat
tcgttgcccggtgcacaggagtggcaacgaaacatggcatggatggtggccactgcgttg
agtgccggtaaggctgccgtagttgaattgcccaccatgcgcgaggtcgaagacctgatg
catatgctacgcaattatggactcaaaccatttgcccctgctccggccggcggctgggtg
ggcgacgtcgccgtgcttaacgcggagaccatgcccgcggccgaccggtatcgcacctat
ctggctgtggcgttgggacaggtgaaggtggtgatcggcacccgtgcggtgatgtatgcg
ccggttgaaggcccggcgctgttcgccattctggaggatgccgcctatcagaacatggac
ggtatgatgccatatccacaggcccgtggcgtgatgcggctgcgcgccaagtcccatggc
ggcgtgttcgtggccatggccaatgcgcgcaccccgcaaagccagtgggaaaacaccggt
ccaggtacagtggagaccccagtgagcggctattccaccacaattcatccgctcgcctcg
ccgctgaaggacgccactccttgggtgcgttggctcaatcgcgatgaacttgcgcgtctt
gccgacccgtccatcggggcgcgcgtgccgcatacggccgtccacgtgctatctaaggct
ttggagagcggccccgtgctgctgtccattccgcaagacagcgtcagtgagactctgagt
tgtgcgaaatgccatcgtcaggcgcgttgtgccaagtgttccggaccgttgcaactaccg
gccgaccgccgggattccacaccgcgatgccgctggtgtggggctgctgccatcaattgg
aagtgcccgggctgtgggcatgaacgtatgcgtgtggtgcgcgtgggtgctgcaggcact
gcggctgaactggccgggttgttccgcggcgtgccagtagttttgtccagcaagacgcag
ggcctggtgcgcgatgtggcttgccagccgatgatcgtcatcgccactcccggtttcgaa
ccgcgcgtgcgtccggtcagtgccgagcagggatcggctggccatgagtatcgtgccgtg
gccgtgctcgacgcttggaccagcttgtatgcgttgggcgtggatgctcgcttggatacg
ttgaccgcgtggatgcgtgcggtgtcgttgtgcgcgccgcgttcccgtggcggccaggcg
ttgattctcggcgaaaccgacccggccctcgcccaatcgctgatgctctgggattcgagg
attcttgcagccaaggatcttgaggagcgtgtggagaccggtatgccgccggccgtggcc
gccgcctgcgtatggggacgccgtgatgcggtgatgacgctgatgcagcgtatcggcgcg
ctgggcggcgattggacggcctgcggcgagctgcccggcatgttgggcccggtgccgatc
gcgcaaccggacacggtcgacgcccgggagctcgaagccacggccgaccgggtgaaggca
gtaatccgtgtgccgcagagtcggcgagccgagctggcggcccgactgcaccgggaaacc
gctcgtcatgtggcgtcccgcgaacccggcgagcttcgcttccgagtagatcccaaggac
ctgatctaa

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