Burkholderia mallei FMH 23344: DM51_1279
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Entry
DM51_1279 CDS
T03523
Name
(GenBank) uracil-DNA glycosylase, 4 family protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bmaf
Burkholderia mallei FMH 23344
Pathway
bmaf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bmaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DM51_1279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmaf03400
]
DM51_1279
Enzymes [BR:
bmaf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DM51_1279
DNA repair and recombination proteins [BR:
bmaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DM51_1279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AIP75696
LinkDB
All DBs
Position
1:complement(1436743..1438092)
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AA seq
449 aa
AA seq
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MAWTEAALEELGLAPAWVRRDAARAADVNEAAAHAAGEAAVAAVARGAQPASPDASREPA
RRIARDGGRDGGQNGASGDAGSASPNDAAHAMARVAGAEASAAAAVADEHAALARQAGDG
RGQARQAAAESGARAAADAPAPAAAPASRTRDATIARGASPDEPGVVGVADEPSVAGGAR
RARTSGGGAEVPASALDLTDAAEATRPAAAPAPAALTGGDAGAAASDEDMSWFDLEPVHE
PALPDVAARPAATTPSVAELGWDELRARVADCARCRLCEKRTNTVFGVGDEHADWMLVGE
APGENEDKQGEPFVGQAGKLLDNMLRALALKRGENVYIANVIKCRPPGNRNPEPDEVARC
EPYLQRQVALVKPKLIVALGRFAAQTLLKTDGSIASMRGRVHQYEGVPVIVTYHPAYLLR
SLQDKAKAWSDLCLANDTYRSAAPAADPP
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcatggactgaagcggcgctcgaagaactggggctcgcgcccgcgtgggtgcggcgc
gacgcggcgcgcgctgcggacgtgaacgaggcggccgcgcacgcggccggagaagccgcg
gtcgcggcggttgcgcgaggagcgcagccggcgtcgccggatgcgtcgcgcgagccggcg
cgtcggatcgcgcgcgacggcgggcgcgacggcgggcaaaacggcgcgagtggcgacgcg
ggatcggcgtcgccgaacgacgcggcgcatgcgatggcgcgtgtcgcgggcgcggaagcg
agcgcagccgccgccgtcgccgacgaacacgcggcgcttgcgcggcaggccggcgacggg
cgcggacaggcgcggcaagcggcggccgaatccggcgcgcgggcggcggcggatgcgccc
gcgccggccgcggcgcccgcatcgcggacgcgggatgcgacgattgcgcgcggggcttcg
ccggacgagccgggcgtggtgggcgtggcggacgagccgagcgtggcgggcggcgcacgc
cgcgcgcggacgagtggcggcggcgcggaggtgccggcgagcgcgcttgacttgacggat
gcggccgaggcaacgcgtccggcggcggcgcccgcgccggccgcgctcaccggtggcgat
gccggcgcggcggcgtccgacgaggacatgtcgtggttcgatctcgaaccggtgcacgag
cccgcgctgccggacgttgccgcacggcccgccgccactacgccgtccgtcgccgagctc
ggctgggacgaactgcgcgcgcgcgtcgccgactgcgcgcgctgccgcctctgcgaaaag
cgcacgaacacggtgttcggtgtcggtgacgagcacgccgactggatgctcgtcggcgag
gcgcccggcgagaacgaggacaagcaaggcgagccgttcgtcggccaggcgggcaagctg
ctcgacaacatgctgcgcgcgctggcgctcaagcgcggcgagaacgtctacatcgcgaac
gtgatcaagtgccggccgcccggcaaccgcaatccggagcccgacgaggtcgcgcgctgc
gagccgtatctgcagcggcaggtcgcgctcgtgaagccgaagttgatcgtcgcgctcggc
cgcttcgccgcgcagacgctgctcaagacggacggaagcatcgcttcgatgcgcgggcgc
gtccatcagtacgaaggcgtgcccgtgatcgtcacgtaccatccggcgtatctgctgcgc
agtctgcaggacaaggcgaaggcctggtccgatctgtgtttggcgaacgatacctaccgg
agtgccgcgcccgccgccgatccgccatga
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