Bombyx mandarina (wild silkworm): 114249034
Help
Entry
114249034 CDS
T05882
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
bman
Bombyx mandarina (wild silkworm)
Pathway
bman03022
Basal transcription factors
bman03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bman00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114249034
09124 Replication and repair
03420 Nucleotide excision repair
114249034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bman03021
]
114249034
03400 DNA repair and recombination proteins [BR:
bman03400
]
114249034
Transcription machinery [BR:
bman03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114249034
DNA repair and recombination proteins [BR:
bman03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114249034
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
114249034
NCBI-ProteinID:
XP_028038289
UniProt:
A0A6J2KDD8
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MSESSKSKSLNLNPSPTLQCKDLHEYLKSRSPQFLETLYNYPTICLAVYRELPELARHFV
IRLLFVEQPVPQAVVTSWVSQTYAKEQAKACTTLSELSVWQEAPIPGGMPGWMLAQSFKK
NLKVSLLGGGRAWSMSSSLEPDGKARDVSFLDAYALERWECVLHYMVGSAQTEGISADAV
RILLHAGLMTRDAEDGSAVITRAGFQFLLLSTPKQVWLFLQHYLHTAERRSLSAAECLAF
LYQLSFSTLGKDYSTEGMSNNMLVFLQHLREFGLVYQRKRKAGRFYPTRLALNILRVRCA
APLEAAAGARGHLVLETNYRVYGYTSSDLQVALLGLFTELIYRFPNVVVGVVSRESVRQA
LRGGITAEQIIHYLEQHAHPQMLKSETGGIRSASMLPPTVVDQIRLWESERNRCVYTEGV
VYNQFLSQADFVVLRDHARAAGVLSWQHERARTMVVTRAGHDDVKKFWKRYSKNS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtcttctaaatcgaagtctttaaatttgaatccttcgcctacactacaatgc
aaagatcttcacgaatatcttaagtcgcggtctccgcagtttctagagactctttacaat
taccccactatatgtctagctgtatatcgcgaattaccagagctagcacgtcacttcgta
atccgcttgctgttcgttgagcagccagtcccacaggcagttgtcacatcctgggtctcg
cagacatatgccaaagaacaagcaaaagcatgcactacactgtcagagctctccgtgtgg
caggaggcgcccataccggggggcatgccgggctggatgctcgcacagtcgtttaaaaag
aacctcaaagtgtcattgcttgggggaggcagggcgtggagcatgtcgtcgtcgctggag
ccggacgggaaggcccgggacgtgtcgttcctggacgcgtacgcgctggagcgctgggag
tgcgtgctgcactacatggtgggcagcgcgcagaccgagggcatcagcgccgacgccgtc
cgcatactgctgcacgccggcctcatgaccagagacgcagaagacgggtccgccgtcatc
actcgcgccggcttccagtttctgctcctgagtacacccaagcaggtgtggctgttcctg
cagcactacctgcacacggccgagcgccgcagcctcagcgccgccgagtgcctggccttc
ctctaccagctcagcttcagcaccctggggaaggactacagcacggagggcatgagcaac
aacatgctggtgttcctgcagcacctgcgggagttcggtctcgtctaccagaggaagcgc
aaggcgggccgcttctaccccacccgcctcgcgctcaacatcctgcgcgtgcgctgcgcc
gcgccgctcgaggccgccgccggcgcgcgcggacacctcgtgctggagaccaactaccgc
gtgtacggctacacctcctccgacctgcaggtcgcgctgctcggcctcttcacggagctc
atctacaggttccccaacgtggtggtgggcgtggtgagccgggagtccgtccgccaggcg
ctgcgcggcggcatcacggccgagcagatcatccactacctggagcagcacgcgcacccg
cagatgctgaagtcagagacgggcggcatccggtcggcgtcgatgctgcctcccaccgtg
gtggaccagatccgcctgtgggagtccgagaggaaccgctgcgtctacacggagggggtc
gtctacaaccagttcctgtcgcaggccgacttcgtggtgctgcgggaccacgcccgcgcg
gccggcgtgctgagctggcagcacgagcgcgcgcggaccatggtggtgacccgggccggg
cacgacgacgtcaagaagttctggaagcgctactccaagaacagctag
DBGET
integrated database retrieval system