Bermanella marisrubri: HF888_12425
Help
Entry
HF888_12425 CDS
T06527
Symbol
pgeF
Name
(GenBank) peptidoglycan editing factor PgeF
KO
K05810
purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:
2.4.2.1
2.4.2.28
3.5.4.4
]
Organism
bmar
Bermanella marisrubri
Pathway
bmar00230
Purine metabolism
bmar00270
Cysteine and methionine metabolism
bmar01100
Metabolic pathways
bmar01232
Nucleotide metabolism
Module
bmar_M00958
Adenine ribonucleotide degradation, AMP => Urate
bmar_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
bmar00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
HF888_12425 (pgeF)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
HF888_12425 (pgeF)
Enzymes [BR:
bmar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.1 purine-nucleoside phosphorylase
HF888_12425 (pgeF)
2.4.2.28 S-methyl-5'-thioadenosine phosphorylase
HF888_12425 (pgeF)
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.4 adenosine deaminase
HF888_12425 (pgeF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cu-oxidase_4
Motif
Other DBs
NCBI-ProteinID:
QIZ84975
LinkDB
All DBs
Position
complement(2677918..2678640)
Genome browser
AA seq
240 aa
AA seq
DB search
MYSADWPVPKHIKTLITTRDGGVSSAPYDSLNLGHHVEDDPQAVKENRSRLYQHLPGEPA
WLQQVHGTVVVDANTAQSGIEADAVFSDSPAAVCAVMTADCLPVLFTNVQGTKVAAAHAG
WKGLMEGVLEATLSKFSGDDVIIAYLGPAIGPNAFEVGPEVRDGFIERNADAESCFRASS
NKGKWLGDMYALARIRLLAQGVKRIYGGMECTFTQEDKYFSYRRDGMTGRMASCIWIENQ
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcgcagattggccggttccaaaacatattaaaacgttgattacaacgcgcgat
ggcggcgtgagtagcgcaccctacgatagtttgaaccttggtcatcatgtcgaagatgat
ccgcaagcggtcaaggaaaatcgttctcgcctgtatcaacatttgcctggtgagcctgcg
tggctacagcaggttcatggcacagtcgtggttgatgcaaatacagctcaatcaggtatt
gaagccgatgctgtgttcagcgattcaccagcagcagtctgcgctgtcatgacagctgat
tgcctacccgtcttatttaccaatgtgcaaggtacaaaggtggctgcagcccatgcaggc
tggaaaggcttaatggagggtgtattagaggcaacacttagcaagttttctggtgatgac
gtaataatcgcctatttgggccctgccatcggaccgaatgcatttgaagtggggcctgaa
gtacgagacggttttattgagcgcaatgctgatgcagagagctgttttagagcaagctca
aataagggtaaatggttgggtgatatgtacgcccttgcgcgcattcgtttattggctcag
ggtgtcaaacgaatctacggtggaatggaatgtacgtttacacaagaggacaaatatttt
agttatcgccgagatggtatgacaggacgcatggcgtcctgtatttggatagaaaatcag
taa
DBGET
integrated database retrieval system