Bermanella marisrubri: HF888_14350
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Entry
HF888_14350 CDS
T06527
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K03072
preprotein translocase subunit SecD
Organism
bmar
Bermanella marisrubri
Pathway
bmar03060
Protein export
bmar03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
bmar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HF888_14350 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HF888_14350 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
bmar02044
]
HF888_14350 (secD)
Secretion system [BR:
bmar02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HF888_14350 (secD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD-TM1
SecD_1st
SecD_SecF
MMPL
Sec_GG
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
QIZ85333
LinkDB
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Position
complement(3082154..3084025)
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AA seq
623 aa
AA seq
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MLNKYPLWKYCLILVISVLGVVYALPNLYPPDPAVQITPAQSGDAVDQYTLSKALDVLDE
AQIQYFGEELQEGKTALIRISDEEKQLQAKGLIQRELGDGFIVALNLAPTTPQWLVDMGA
GPMTLGLDLSGGVHFLMEVDMQQFLTQRIDGYRDTLKRNFREERLRYKRAVLDEEKRIKY
EFIDEETRDKAENFVRREYAEFLTDTRDEEGRHWLVLTMTPAKIKELEDYALKQNLTTIR
NRVNELGVAEPMVQRQGRNRIVIELPGVQDTAAAKKILGKAANLEFRLEAKPGASRFSSE
EFEFKNPERGRTSARLEKSVIVTGDNVSNAQPAFDENGQPQVNITLDSTGGALMGKVTKK
AIKRRMGVLFIEHKTRTRYVERDGVEVPVEDKYTEKKIISLATIQSALGSSFRITGLQAA
EASELALLLRAGALAAPMYFVEERTVGPSMGKENIDLGVTSVKLGLALVLIFMIAYYRVF
GLIANVALAVNLTLLTAVMSALGATLTLPGIAGIVLTVGMAVDANVLIFARIKEELKSGM
NVQQAIHSGYDKAFLTILDANITTLIVAIILFAVGTGPVKGFAVTLSIGIITSMFTAIMV
TRALVNLIYGGRRLQKIAIGGGV
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgctgaataagtatcctctttggaaatactgcctgattcttgtaatcagtgtgcttggg
gttgtgtacgcactacctaatttatacccgcccgatcctgcggtacagatcacgccggcg
caaagtggcgatgcggttgatcaatacacgttaagtaaagcattggatgttctggatgaa
gcgcaaattcaatactttggtgaggaattgcaagagggtaaaaccgcgctaattcgtatt
agcgatgaagaaaaacagttgcaagcaaaaggacttattcagcgcgagctgggtgacggc
tttattgtggcattgaatttagcaccgacaacaccgcaatggttagtggacatgggtgca
ggtcccatgacattaggtcttgatttaagtggcggtgtgcacttcttgatggaagtggat
atgcagcaattcctaactcagcgtatcgatggctatcgcgatacattgaagcgtaacttc
cgtgaagaacggttgcgctataagcgtgcggttttagacgaagaaaaacgtataaagtac
gaatttatcgacgaagaaacccgcgataaggcggaaaacttcgtgcgtcgagagtacgca
gagttcttaacagatacccgtgacgaagagggtcgtcattggttagtcctaacgatgacg
ccggctaaaatcaaagaattggaagattatgctttaaagcaaaacttaaccactattcgt
aatcgtgtaaacgaattgggtgtggcggagccaatggtacaacgccaaggtcgtaatcga
attgtgattgagctgcctggtgttcaggataccgcagccgcgaaaaagattttgggtaaa
gcggcaaaccttgagttccgattagaagctaaaccaggtgcgagtcgtttcagctcagaa
gagtttgaatttaaaaatcccgagcgtggtcgtacttctgcccgcttagaaaaatccgtt
atcgtcaccggtgataatgtttctaacgcgcaacctgcattcgatgagaatggtcagcct
caagttaatattaccctagacagcaccggcggtgcgctaatgggtaaagtcactaaaaaa
gcgatcaagcgtcgcatgggtgtacttttcattgagcataaaactcgcacccgttacgtg
gaacgtgacggtgtagaagttccggtagaagataaatacaccgagaagaaaattatttct
ctggccactattcaaagtgcattaggtagttcgttccgcatcacaggtttgcaagccgcg
gaagcatccgagctcgcactgctattgcgagcaggtgctttagctgcgccgatgtacttt
gtagaagagcgcacagtgggcccaagcatgggtaaagaaaacatcgatttaggtgtgacc
tctgtgaagttaggcttagcattggtgttgatctttatgatcgcgtattaccgagtattc
ggtttgattgccaatgtagcgttggcagtgaatttaaccttgttgaccgctgttatgtct
gcgctcggggcgacactcacgctacccggtattgcaggtatcgtattgactgtgggtatg
gcggtggatgccaatgtgctcatattcgcgcgaataaaagaagaattgaaatcaggtatg
aatgtgcagcaagctattcatagcggctacgacaaagcgtttctaaccattttggatgcg
aatattacaacacttatcgtagcaattattctatttgctgtaggtaccggaccggttaaa
ggtttcgccgtgactttaagcattggtatcattacttcaatgtttaccgcgattatggtg
actcgtgcattggttaatttgatttatggtggtcgtcgtttacagaagatcgctatcggc
gggggcgtataa
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