Burkholderia metallica: WJ16_05670
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Entry
WJ16_05670 CDS
T04871
Name
(GenBank) IclR family transcriptional regulator
KO
K20329
IclR family transcriptional regulator, positive regulator for flagellar biogenesis
Organism
bmec
Burkholderia metallica
Pathway
bmec02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bmec00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
WJ16_05670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bmec03000
]
WJ16_05670
Transcription factors [BR:
bmec03000
]
Prokaryotic type
Helix-turn-helix
IclR family
WJ16_05670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_IclR
IclR
MarR_2
HTH_24
MarR
HTH_36
Rrf2
HTH_Crp_2
TrmB
HTH_20
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AOJ31037
LinkDB
All DBs
Position
1:complement(1248826..1249650)
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AA seq
274 aa
AA seq
DB search
MSTTVTPPASRDRESSPDEITALARGLAVLRRIAAADAPVSNRELTELTGIPKPTVSRIT
ATLVSAGFLFQLPDSERFVLTASVLELSHGFLRNFDIRARSRPFMIELAERTSLSVHLAV
RDRLDMVAIDVIRPRSAVLVTRLEIGSRMDIARTAVGRAYLAALEDDERRQLLESLRTTA
GDDWPHVSARLNPALDDAMRDGHAIAIGEWREGLNAVAAGFVGPSGQRYSVNCGGAAHQC
PPEWLHEHVVPALHECIAKITREIGGAPARRVGV
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaccactgtaacccctcccgcgtcgcgggaccgtgaatcgtcgcccgacgagatc
accgcccttgcccgcggcctcgccgtgctgcgccgcatcgctgctgccgacgcgcccgtc
agcaaccgcgagctgaccgagttgaccggcatcccgaagccgaccgtctcgcgcatcacc
gcgacgctcgtcagcgccggcttcctgttccagctgcccgacagcgagcgcttcgtgctc
accgcgtcggtgctcgaactgagccacggcttcctgcgcaacttcgacatccgcgcgcgt
tcgcggccgttcatgatcgagctggccgagcgcacgtcgctgtccgtgcacctcgcggtg
cgcgaccggctcgacatggtcgcgatcgacgtgatccgcccgcgctcggccgtgctcgtc
acgcgcctcgagatcggctcgcggatggacatcgcgcgcaccgcggtgggccgtgcgtat
ctcgccgccctggaagacgacgagcgccgccaactgctcgaatcgctgcgcacgacggcg
ggcgacgactggccgcacgtgtccgcgcgcctgaaccccgcgctcgacgacgcgatgcgc
gacggccacgcgatcgcgatcggcgaatggcgcgagggcctgaatgccgtcgcggccggt
ttcgtcggcccgtcgggccagcgctattcggtgaattgcggcggcgcggcgcatcagtgc
ccgcccgaatggctgcacgaacacgtggtgcccgcgctgcacgaatgcatcgcgaaaatc
acccgcgagatcggcggcgcaccggcccggcgcgtcggcgtgtaa
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