Bacillus methanolicus: BMMGA3_12340
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Entry
BMMGA3_12340 CDS
T03209
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bmet
Bacillus methanolicus
Pathway
bmet03410
Base excision repair
bmet03430
Mismatch repair
bmet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BMMGA3_12340 (recJ)
03430 Mismatch repair
BMMGA3_12340 (recJ)
03440 Homologous recombination
BMMGA3_12340 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmet03400
]
BMMGA3_12340 (recJ)
DNA repair and recombination proteins [BR:
bmet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BMMGA3_12340 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BMMGA3_12340 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BMMGA3_12340 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AIE60861
UniProt:
I3EAV4
LinkDB
All DBs
Position
complement(2446323..2448689)
Genome browser
AA seq
788 aa
AA seq
DB search
MLKSKTRWVVRQSDRKKAEKLMQELNITPLVASLLVNRGIDTVESARYFLFPKDQSFHDP
YLFKDMDKAVERIRLAIERQEPILIYGDYDADGVSSTSVMMMTLRDLGANVDFYIPNRFS
EGYGPNEAAFRLAAKRGFKLIITVDTGISALHEANVASELGIDLIITDHHEPGPVLPKAL
AIIHPKLKDSTYPFRELAGVGVAFKLSHALYGHVPEHFLEIVAIGTIADLVSLKGENRLI
AYKGIQQLKATKNIGLQSLLKLSGIEPESIDEETIGFVIAPRLNAAGRLESAEPAVDLLL
TDDQDKAEMLAKKIDLLNKERQELVNAITEEAIKEVESYYPPEENQVLVIGKEGWNSGVI
GIVASRLVEKFYRPVIVFSFDTEKGLAKGSARSIDGFDLFKNLSACRDILPHFGGHPMAA
GMNLHLKDVDELRIRLNDLAKEQLTEEDFIPKTYLDGKIELSDIHLTAIEQMQMLAPYGV
DNPKPKVMIENVNIAAIRKIGSDQSHLKITIESNGASLDGIGFGLGHYYEHISPFSKLSV
IGELAINEWNNIRKPQVFLQDLAVQSWQLFDFRGLKRFDKLAELVPRENRKWIVFNEENV
PKFKGILNDEICLITSCEDAIKMEVDGLNLVLADLPPSKKILEHLLAGKKPARIYAQFYK
ENSDFFSTMPTRDHFKWFYAFLAKKGTFDLKRHGDDLAKYRGWTKETIEFMSQVFFELKF
VTINNGFITLEKNISKRDLSDSKTYQKKLAQFTLENDLLYSSFQQLKGWFDKLFQESVKN
EEAMKEWI
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagtcaaaaacaaggtgggttgtccgccaatccgaccggaagaaagcagaaaaa
ttaatgcaagaattaaacattactcccctggtagcatcattgctagttaatcgcggaatc
gataccgtggaaagtgcacggtattttctatttccaaaagatcagtcttttcatgatcct
tatttatttaaggacatggataaagctgtagaaaggattcgtctggcgattgaaaggcaa
gagccgatattaatatatggcgattatgatgctgatggagtcagcagtacttctgtgatg
atgatgacattaagagatttgggtgcaaatgttgacttttacatacccaatcgtttttct
gaaggatatggtccaaatgaagcggctttcagactggcagcaaaaagagggtttaagctc
ataatcacggttgatacaggtatttctgcccttcatgaagcaaacgttgccagtgaactt
ggaatcgatttaatcattaccgatcatcacgaaccgggacccgtacttccaaaagctttg
gcgatcattcatccaaaattgaaagacagtacatatccatttcgtgaattagctggtgta
ggagtagcttttaagctttcccacgcgctttatggacatgtgccggaacattttcttgaa
attgttgcaattgggacaatagcagaccttgtttctcttaaaggagaaaaccgcctgatt
gcctataaaggaatacaacaactaaaggcaacgaaaaacatcggactacaaagtctgtta
aaattaagcggcattgaaccggaatcgattgatgaagaaacgatcggctttgttattgca
ccgaggctcaatgccgccggaaggcttgaaagtgcagaaccagcagtcgatttattattg
actgatgatcaggataaagcggaaatgctggcgaaaaaaatcgacctgttaaataaggaa
cggcaagagcttgttaatgcgattacagaagaagctataaaagaagttgaaagctattat
ccgcctgaagaaaatcaagttcttgttattggaaaagaaggctggaattccggagtgatt
ggaattgttgcttcaagactagttgagaagttttatagacctgtgattgtttttagtttt
gatacagaaaaagggttggctaaaggatctgcaagaagcatagatggttttgatttgttc
aaaaacctttctgcatgcagagatatcttgccgcattttggcggccatccaatggcagca
ggaatgaatttacatctcaaagatgtggatgagcttcgtatcagacttaatgatctggca
aaagaacagttgacagaagaagattttatcccgaaaacatatttggatggtaaaatagaa
ttaagcgatatccatttaaccgctatcgaacaaatgcaaatgcttgctccttacggtgtg
gacaatccgaaaccgaaagtgatgatcgaaaatgtaaatatcgcagccattagaaaaatc
ggctcggaccaaagccatctgaaaataacaattgaaagtaatggagcatcgcttgatggc
attggttttgggttgggacattattatgaacatatttcccctttttccaaactgtcggta
attggagaattagccattaatgagtggaacaatattcgcaaaccgcaagtttttcttcaa
gatttggctgttcaatcatggcagctgtttgattttcgcggtttaaagcgttttgacaaa
ttagcagagcttgtaccgcgcgaaaatcgaaaatggatcgtttttaacgaagaaaacgtg
ccaaaatttaaaggcatcctaaatgatgaaatctgtcttataacttcgtgtgaagatgct
ataaaaatggaagttgacggattgaatctcgttttggctgatctgccgccatccaagaaa
atcctggaacatcttttagccggcaaaaaacctgccagaatatatgctcaattttataaa
gaaaacagtgacttttttagcaccatgccgacgagggaccatttcaaatggttttatgct
tttttagcaaaaaaaggaacgttcgatcttaaacgccatggggacgatctagctaaatac
agaggctggacgaaagaaacaattgaatttatgtcgcaggtgttttttgaactgaaattt
gttacaataaacaatggttttataacattagaaaaaaatattagcaaacgggatctatca
gattcaaaaacttaccagaaaaagctggcgcaatttactctggaaaatgatttattatat
tcatcgtttcagcagttaaaaggctggttcgacaagctcttccaagagtcagtgaaaaat
gaggaggcaatgaaagaatggatttaa
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