Priestia megaterium QM B1551: BMQ_1701
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Entry
BMQ_1701 CDS
T01208
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
bmq
Priestia megaterium QM B1551
Pathway
bmq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMQ_1701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmq03019
]
BMQ_1701
03009 Ribosome biogenesis [BR:
bmq03009
]
BMQ_1701
Messenger RNA biogenesis [BR:
bmq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BMQ_1701
Ribosome biogenesis [BR:
bmq03009
]
Prokaryotic type
rRNA helicases
BMQ_1701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UvrA_inter
AAA_30
Helicase_RecD
AAA_19
U6-snRNA_bdg
Motif
Other DBs
NCBI-ProteinID:
ADE68732
UniProt:
D5DNM6
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All DBs
Position
1683940..1685340
Genome browser
AA seq
466 aa
AA seq
DB search
MKKFSDFNLSKDIEKAVHNLGFEEATPIQAEAIPIAMAGKDLIGQAQTGTGKTTAFGIPL
IERVELGEEGIQGIVLAPTRELAIQVAEELNRIGQVKGVKTLPIYGGQDINRQIKALKNR
PHIISATPGRLKDHMKRRTIRLNHIRTAVLDEADEMLNMGFIEDIQSILGGISSPHQTLL
FSATMSKQVQSLAQKFMNDPELVKVKAKELTVKNIEQQYMEIPENRKFDVLCNLVDLQVP
DLAIVFGRTKKRVDELAEGLKKRGYAAEGIHGDLTQSKRADVIRQFKNHTIEIMVATDVA
ARGLDITGVSHVYNFDIPQDPESYVHRIGRTGRAGTKGLAVTFITPRERNHLKVIEDVTK
TKMSRQSPPTSSEVMAGHQEAIIHQVLTAIDKGEFVEYKPMAEKLLEEVDSVSLLSATLK
LLTKESNMTSVQLTEVAPLRNKKAKTERKRNRGRKETVGRKKTYRK
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattttctgattttaatttaagcaaggacattgaaaaggcagttcataacttg
ggttttgaagaggctacgccgattcaggctgaagctattccgatagctatggcgggtaaa
gatctaattggacaagctcaaaccggtactggaaagacaacagcttttggcattcccctt
atagagcgggttgagcttggtgaagaagggattcagggaatagtcttagcaccgacacgt
gaactggctattcaagtagcagaggagttaaatcgaattggacaggtaaaaggagttaaa
acgctaccgatttatggaggccaggatattaatcgtcagattaaagcccttaaaaacaga
ccgcatattatctcggcaaccccaggacgccttaaggaccatatgaagcgaagaaccatt
cgtttaaatcatattcgtacagctgttctggatgaagcagatgagatgttaaatatgggc
tttattgaagatatccaatcgattcttggtggcatctcttctccccatcaaactttacta
ttttcagcaactatgtcgaagcaagtacaaagtctagcccagaaatttatgaacgatcct
gaactcgtaaaagtaaaagcgaaggagttaacggtaaagaacattgagcagcaatatatg
gaaattccagagaatcgaaaatttgatgttctttgtaatcttgtagaccttcaagtacca
gaccttgctattgtgtttggacgcacaaaaaaacgtgtggatgaacttgctgaaggacta
aaaaagcgtgggtatgcagcagaaggcattcatggagatcttacacaatccaaacgtgcc
gatgtaattcgtcaattcaagaatcatacgattgagattatggttgcaaccgacgttgca
gcaagaggacttgatattacaggtgttagccatgtctataattttgatattcctcaggac
cctgaaagctatgttcatcgtattggccgaacaggacgggcaggtactaagggattggca
gttacctttataactccaagagaacgtaatcatttaaaagtgattgaagatgtcacgaaa
accaaaatgtctagacaatcacctcctacttctagtgaggtaatggcagggcatcaggaa
gcaatcattcaccaggttttgaccgctatcgacaaaggggagtttgtggaatataagcca
atggcggaaaagctattagaagaagtggattctgtttctttactgtcagccactttaaag
ctcttaacaaaagaatcaaatatgacctctgtccaattgactgaagtggcaccacttcgt
aataaaaaggcaaaaacagagcgtaagagaaatagagggagaaaagaaacagtaggccgt
aaaaaaacatatagaaaataa
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