Halobacteriovorax marinus: BMS_0003
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Entry
BMS_0003 CDS
T01659
Name
(GenBank) putative DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
bmx
Halobacteriovorax marinus
Pathway
bmx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BMS_0003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmx03400
]
BMS_0003
DNA repair and recombination proteins [BR:
bmx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BMS_0003
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
SbcC_Walker_B
Sigma54_activat
Motif
Other DBs
NCBI-ProteinID:
CBW24945
UniProt:
E1X1M6
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All DBs
Position
3353..4465
Genome browser
AA seq
370 aa
AA seq
DB search
MQSFKISKLQVTNFRNLQPDIIEFNSGINCILGENGNGKTNILEALHVLSTRKSFRKNTA
FPQFLGIDCEQPEIIFSSVFLDEHSNKMSLSAKMDAKTTHWFVDGQPMKRKLDIKLVFIN
PFDSYAFHNTSSFRRQWMDQHISQIDSNYKKCLSRYNSSLRFRNSLLSKKPAKYLEQIRA
IDLELARYSCILTNTRLKFLSEIESFCTQTFKEIFSEEHLLKITLDSRVIGASEDDIYQM
LQERLPKDEIVGHTTYCVHKDDYVLLFDGLNSFEYCSLGQQKMSYLSLLFAYIELFRYNF
NSFPMVLIDDVSGELDKNRWQKLINYLERSSFQVLITTANEKFKEELETIHGANKIYVQA
GSITNMPNSR
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagttttaaaatttctaagctgcaagttacaaactttagaaacttgcagccagac
attatagaattcaatagtggtatcaattgtattcttggtgaaaacggaaatggtaaaaca
aatatcttagaagctctccatgtactgagcacaagaaaatcttttcgtaaaaatacagct
tttccacaatttctagggatagactgtgaacaaccagaaattatattttcatcagtcttc
ttggatgaacattcaaataaaatgagtctctcagcaaaaatggatgcgaagactactcat
tggtttgtagatggacaaccaatgaaaagaaaattggatataaaattagtttttataaat
ccttttgattcctatgcattccataatacttctagttttagaagacagtggatggatcag
catatttctcagattgattcaaactataagaaatgcctctcaaggtataactcttcgctt
cgctttagaaattctctattgagcaagaaaccagcgaagtatttagaacaaatccgtgca
attgatttagagttggccagatatagctgtatcttaacaaatacgagacttaaatttttg
agtgagatagagagcttctgtacacaaacttttaaagaaattttcagcgaagaacattta
ttgaaaatcacacttgattcaagagttattggagcgagtgaagatgacatctatcaaatg
cttcaagagcgtcttccaaaagacgaaattgtaggtcatacaacatactgcgttcacaaa
gatgactatgtgcttctttttgacggtttaaattcttttgaatattgctctttaggtcag
caaaaaatgagctatttgagcctcttatttgcctatatcgagctgtttaggtataacttt
aactccttccctatggtcttaattgacgacgtctctggtgagctagataagaaccggtgg
cagaaattaattaattacttagaaaggagctcgttccaagttttaataacaacagcgaac
gaaaaatttaaagaagaattagagactattcacggtgctaataaaatttatgtccaagca
ggttctatcacgaacatgcctaattcaagatga
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