Halobacteriovorax marinus: BMS_3339
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Entry
BMS_3339 CDS
T01659
Symbol
ruvB
Name
(GenBank) holliday junction DNA helicase ruvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
bmx
Halobacteriovorax marinus
Pathway
bmx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BMS_3339 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmx03400
]
BMS_3339 (ruvB)
Enzymes [BR:
bmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BMS_3339 (ruvB)
DNA repair and recombination proteins [BR:
bmx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BMS_3339 (ruvB)
RecFOR pathway proteins
BMS_3339 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
RuvB_C
AAA_lid_4
AAA
AAA_5
TIP49
AAA_16
Sigma54_activat
Mg_chelatase
nSTAND3
NTPase_1
bpMoxR
AAA_3
RNA_helicase
AAA_14
ResIII
Sigma54_activ_2
DUF815
IstB_IS21
MCM
TsaE
Parvo_NS1
AAA_18
Rad17
TniB
NACHT
AAA_25
Motif
Other DBs
NCBI-ProteinID:
CBW28083
UniProt:
E1X113
LinkDB
All DBs
Position
complement(3325861..3326853)
Genome browser
AA seq
330 aa
AA seq
DB search
MSEERVFDSNSSREESRQEIFLRPKDFSEYIGQRKVVQNIEVMVESAKIRKQAMDHVLLS
GPPGLGKTSLAMIIASALGSHLHVISGPAIEKKGDLAAILTNLEEGDVLFIDEIHRMNIS
VEEILYSAMEDYRLDILIGEGASARTMEISISPFTLIGATTRSGLLSSPLRDRFMAHLHF
DFYEHSELAKIVENNSKKLSIGLEGEAKNHIARCSRGTPRIANRILRRVRDFAVVESKES
ICEEAVAKALDLMEIDEYGLDRMDRKVLEVIHDYYAGGPVGIEALCATLSEDRTTIEDVY
EPFLLKEGFLIRTPRGREISEKAKKHLLSI
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagaaagagtttttgatagcaatagttctagagaagaaagtagacaggaaatc
tttctaagaccgaaagatttctctgaatatattggacagagaaaagtcgtgcaaaatata
gaagtgatggtcgagtcagcaaaaattagaaagcaggcgatggaccacgttctcctctct
ggccctcctggtttaggaaagacttctttggcgatgatcattgcaagtgctttaggctct
catcttcacgttatctctggtcctgctattgagaagaagggtgatctcgcagcaatcctt
actaatttagaagaaggtgacgttctctttattgatgaaattcatagaatgaatatatcc
gttgaggaaatactttattctgccatggaagactatagactagatatcctaataggtgag
ggtgcttcggccagaacaatggagatttcaatatctccttttactttgattggagcaact
actcgttcaggacttctttcaagcccacttagggaccgcttcatggcccacctgcacttt
gatttctatgagcatagtgaacttgcaaaaatagtagagaataactctaagaagctctct
attggccttgaaggtgaagctaaaaatcatatagcaagatgttcaagagggactccaaga
attgctaaccgcatacttagaagagtgagagactttgctgttgtggagagtaaggaatct
atttgtgaagaagctgttgcaaaggctttagatctgatggagatcgatgagtatggccta
gatagaatggaccgaaaagtgttggaggttatacatgactattacgccggaggtcctgta
ggtattgaagctctttgtgctacgttatctgaggatcgaacgacgattgaagatgtctat
gagccgtttctcttaaaagaggggttcttaattagaaccccaagaggtcgagagatttct
gagaaagctaaaaagcatctcctctctatttaa
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