Bacillus pseudomycoides 219298: DJ92_1492
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Entry
DJ92_1492 CDS
T03239
Name
(GenBank) viral (Super1) RNA helicase family protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bmyc
Bacillus pseudomycoides 219298
Pathway
bmyc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DJ92_1492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmyc03400
]
DJ92_1492
Enzymes [BR:
bmyc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DJ92_1492
DNA repair and recombination proteins [BR:
bmyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DJ92_1492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
AAA_22
AAA_12
AAA_16
DEAD
T2SSE
AAA
nSTAND3
AAA_17
AAA_18
NTPase_1
AAA_28
TsaE
UvrD_C
AAA_29
HHH_5
DUF4926
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AIK39885
UniProt:
A0A2H3MDG5
LinkDB
All DBs
Position
complement(1394154..1396490)
Genome browser
AA seq
778 aa
AA seq
DB search
MGNQHAMDLFEEEQKFIKAQVLHTIFHNEENLYSVVSMKIIETNETYDEKKVMINGHFPR
MHEDEVFTLTGHFKDHPKYGKQYLVETFKKELPQTKTGMVQYLASDLFKGIGKRTAEKIV
DHLGEHAISKIMDDPAALEGVVNKQKAQEIYDTIIEHQGLEKVMSFLNGYGFGTKLSIKI
YQQYKEMTLEVIRNNPYQLIEEVDGIGFGRADDIGRALGISGNHNDRVRAGCFYTLENVS
LQEGHVFMEKGQLVRETVSLLNNQEGNVTEEDILQCVEMMQGEGKIIIEEDRIYLASLFY
SEKGVVKSIRRLMNQEETPSFPEAEVLLTLGKIEEQLKVQYAPLQQEAIQTALHKPMMLL
TGGPGTGKTTVIKGIVEMYASLHGLSLSPQDYSDDNPFPILLTAPTGRAAKRMSESTGLP
ACTIHRLLGWTPEGSFQRNETDPVQGKLLIIDEFSMVDIWLANQLFKSLPTNIQVIVVGD
EDQLPSVGPGQVLKDLLDAGAIPTVKLTEIYRQAEGSSVIQLAHAIKNGTLPPDLAQNKK
DRSFIGCSGAQIVEVVKQVCENAKTKGFNARDVQVLAPMYRGPAGINVLNEALQEVFNPK
KEKSREIAYGDVVYRTGDKVLQLVNQPESQVFNGDIGEIVSVFYAKENVEKQDMVVVSFD
GIEVTYIKPDLNQITHAYCCSIHKSQGSEFPIVIMPIVKSYYRMLRRNLIYTGITRSKKF
LIICGEESAFQSGVNRLDDSMRQTTLAGRLQESKGEVQMVTIDGQEMDVENISPYDFM
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatcaacatgcaatggatttgtttgaggaagagcaaaaatttataaaagcacaa
gttcttcataccattttccacaacgaagaaaacctctattccgttgtcagtatgaaaatc
attgaaacaaatgaaacatacgacgaaaaaaaagtgatgatcaacggtcactttccccgt
atgcatgaagatgaagtatttacattgacaggtcactttaaagaccacccaaagtacgga
aagcaatacttagttgaaacatttaaaaaagaattacctcaaacaaaaacaggtatggtg
caatatttagcgagtgatttatttaaaggaattgggaagcgaacagcagaaaagattgtt
gatcatctcggagaacatgcgatttctaaaattatggacgaccctgctgcattagaaggt
gttgtaaacaagcagaaagcgcaagaaatttatgacacaattattgaacaccaagggctt
gaaaaggtcatgagctttttaaatggttatggttttggaacgaagctctcgattaagatt
tatcagcagtataaagaaatgacgcttgaagtgattcgaaataatccatatcagttgatt
gaagaagtcgatggcatcggttttggaagagctgacgatataggacgagcgctagggata
tctggtaaccataatgatcgtgtgagagcaggatgtttctatacgttagaaaatgtttcg
ctccaagaaggtcatgtgtttatggaaaagggtcaactagttcgagaaaccgtatcgctt
ttaaataatcaagagggtaatgtgacggaagaagatattttgcaatgcgttgaaatgatg
caaggtgaagggaaaatcattatagaagaagaccgcatttatttagcttcgttattctat
tccgaaaagggcgttgtcaaatcaatccgccgtctcatgaaccaagaagagacgccttcg
tttcctgaagcggaagtattattaacgttagggaaaattgaagagcagctaaaagtacag
tatgcgccgcttcaacaagaggcaattcaaactgcgcttcataagccgatgatgttatta
accggcggacctggtacagggaagacgaccgttattaaaggaattgtcgaaatgtatgct
tccttgcatggtttatcattaagcccgcaagattacagtgatgataatccgtttccgatt
ctgttaacagctccgacaggccgcgctgcgaagcggatgagtgagtcaacagggcttcct
gcttgtacgattcaccgcttacttggttggacgccagaaggatctttccagcgtaatgaa
acggaccctgtacaaggaaagttacttatcattgatgagttttcaatggttgatatttgg
ctcgcgaatcaattgtttaaatcattaccaacaaacattcaagtaattgttgtaggtgat
gaagatcaattaccttctgtagggcctggacaagtgttgaaagatttattagatgctggt
gcaattccgacagtgaagttaacagagatttaccgtcaagcagaagggtcatccgttatt
cagcttgcccatgcgataaaaaatggtacgctgccaccagacttagcacaaaataaaaaa
gatcgttcgtttattggttgctcaggtgctcaaattgttgaggttgtaaaacaagtatgt
gaaaacgcgaagacgaaagggtttaatgcaagagatgtccaagtgttagcgcctatgtat
cgcggtccggcaggtattaatgtgctaaatgaggcactccaagaagtatttaatccgaag
aaagaaaagagtagagaaattgcctacggtgatgttgtgtatcgaacgggtgataaagta
ttgcagctcgtaaatcaaccagaaagccaagtgtttaatggtgacattggagaaattgtt
tctgtattttatgcaaaggaaaatgtggagaaacaagatatggttgttgtttcgttcgat
gggattgaagtaacgtatataaagccagatttaaatcaaattacacatgcgtattgttgt
tcaattcataagtcacaaggaagtgaatttccaattgtaattatgccgattgtaaagagt
tattaccgcatgttacgccgtaatttaatttatacaggtattacgagaagtaaaaagttt
ctaattatttgcggagaagaatcagcctttcaatctggtgtgaatcgtcttgatgattcc
atgcggcaaacaacgttagctggtcgcttgcaggaatcaaaaggggaagtgcaaatggtt
acgattgatggccaggagatggatgtggaaaacatttcaccgtatgattttatgtag
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