Brassica napus (rape): 106371210
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Entry
106371210 CDS
T04128
Name
(RefSeq) probable E3 ubiquitin ligase SUD1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
bna
Brassica napus (rape)
Pathway
bna04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106371210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bna04121
]
106371210
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106371210
Ubiquitin system [BR:
bna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
106371210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINGv
Motif
Other DBs
NCBI-GeneID:
106371210
NCBI-ProteinID:
XP_013666703
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All DBs
Position
A1:2712969..2719723
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AA seq
832 aa
AA seq
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METENKEAVPTEAKDMKNEDIDICRICQSPEEPNNPLRHPCACRGSLKYVHTDCIFLWIN
RRRRKHCEICKRSYSIVPVYSDNAPERLPCQELLMSLLLRAFRFMTLILPWLLAITFHSY
CMFFLESKRVFELSCFFLGLLYTVEIVTEITFIAVLRVVYEELVRTEHELLRRVHLIANG
LRHKGVTRVLLVLWKCVRVLCDWWHDQLLHLTFFHDMFMRGPLALAFVPRNTQLDELGSI
RRFLFFLDDNTFAVLAINICWSFLDYMLPYLIGQAVFVLLRCFPPHGWVLENISEITVGH
IVLLSVWLAYLKSVFTLIRNPTRARWFSLSVKDALILCIKIILLPLMLGCWIDFCTFPLT
GGTVSQRLEVVSDNPLIAAKDWCIGIGYLLVALSCMKLIQEIVQKRAFWYLLDVTGPNYK
ITKLHLRSLLFAFAFHGAVVVIVFHFPIKTITLINRSFFPLKFGVYKDEFMLGLLAAYIC
CPRWLANSIKQSIKPIVHKWITVVSSCLKLSGFLVRRDGMNHNVRLAFGIAEGCMVRFYG
SQSDTACEEDTHEQRDERFMLRIGLLLVLAALSMFLVSTTFMALPVLVGRAFFHSISFYM
LSFGLEHDDICAFWTGLCIMRKIYKITCFVCDHIVTRRVDLLLKHVMKWIQNVLLFSIWI
FVVPGLLGLLINLMIIIPSQVPLDESPVYNFLHHWLIGVYVLHICIALTMFTPVTCFATV
AWREKLQRIRSVGINHLPFTWLIRDVIGSAINTLLTTLCVPYVMMNSLFPVLGFSREANL
AVQRFVWPALLAFMVIWFSAKLVRNLIIYIHQVEFDNRFKVGERLVDFIEDL
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggagacagaaaacaaagaagctgttccgacagaagcaaaagacatgaaaaacgaggat
atagacatttgccgaatctgccagtcaccggaggaaccaaacaatccgttgaggcatccc
tgtgcatgtcgtggctctctcaagtatgtccacactgactgcatatttctctggatcaat
cgtcgtagacgcaagcactgcgagatttgtaaacgcagctactcaatcgttccggtctat
tccgacaacgctccagagagacttccatgtcaagaactcttaatgagccttctactgaga
gcatttcgtttcatgactctgatccttccttggctcttggcgattactttccactcatac
tgcatgttctttcttgagagcaagagagtttttgaactgtcatgtttctttcttggtctt
ctttacaccgtcgagatagtgactgaaatcactttcatcgctgttctgagggtagtctat
gaagagcttgtaagaacagaacacgagttgttacgccgtgtgcatctcatagcgaatggt
ctaagacataagggtgttactagagttctgcttgtgttatggaagtgtgtgagagttctt
tgtgattggtggcatgatcagctcttgcacttaaccttcttccacgacatgtttatgaga
ggacctcttgcacttgcgtttgttcctcgaaacacacagcttgatgagcttggatccata
agaaggtttcttttcttcttggatgacaatacttttgctgttcttgccatcaacatctgt
tggtctttcctagactatatgttaccttatttgattggccaagctgtctttgtgctccta
cgctgtttccctccacacggttgggttttggaaaacatatctgagattacagttggacac
atagttctactctcagtttggttggcttaccttaaaagcgtcttcactctgattcggaat
ccaaccagagcaagatggttttcactctcagttaaagatgcattgatcttgtgtattaaa
atcatccttctgccgttgatgcttggttgctggatagatttctgcacgttccctctaacc
ggagggacagtttcacaaaggcttgaggttgtttcagacaatccgctcatagctgctaaa
gattggtgtataggaatagggtacttgcttgttgctttgtcttgcatgaagcttatccaa
gagattgttcagaaacgtgcgttttggtacctcttagatgtcacaggaccaaactacaaa
atcactaaactgcatcttcgttccttactctttgcctttgctttccatggagcagtggta
gtgattgtgtttcactttccgataaagacaatcactctcatcaaccggtcttttttccct
ctcaagtttggggtctacaaggatgagttcatgcttggcttactcgctgcttatatatgc
tgccccaggtggctagccaactctataaaacaatctatcaaaccaatagttcacaagtgg
atcactgttgtcagttcttgcctcaagttaagtggtttcttggttagaagagacggtatg
aatcataatgtgagactagcttttggcatagctgaaggatgtatggtgagattttatgga
tctcagagcgatacagcatgtgaagaggatacacacgagcaaagagatgaaaggtttatg
ctgaggattggactgttgctagttctagctgctttgagtatgtttcttgttagtacaacc
tttatggctttaccggttctggttgggagagccttcttccactctatctctttctacatg
ctaagtttcggactcgaacacgatgatatttgtgctttctggactggattgtgtatcatg
cgaaaaatctataagatcacatgcttcgtctgtgaccatatcgtgacgagaagagtcgat
ttgcttctcaaacatgtcatgaaatggatccagaatgtcttgttgttctccatatggatc
tttgtggtacctggcttgctcggtctccttatcaaccttatgatcatcatcccatcacaa
gttccgctagacgaatcacctgtgtataactttctccaccactggttgatcggtgtgtac
gtccttcacatctgtatcgccttgactatgttcacaccagtcacctgcttcgcgaccgtt
gcatggcgagaaaagcttcaaagaataagaagcgtcggtatcaaccatcttcctttcaca
tggctgattcgagatgttattggctcggccataaacacacttctaaccactctctgcgta
ccttacgtgatgatgaactctctattccctgtacttggattctcacgtgaagccaactta
gccgtccaacggttcgtgtggccggcgttgctagcatttatggtcatatggtttagtgcc
aagctcgttcgtaacctcatcatttacattcaccaagtcgaattcgataaccggttcaaa
gtgggagagaggttggtcgatttcatcgaagatctctga
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