Brassica napus (rape): 106377123
Help
Entry
106377123 CDS
T04128
Name
(RefSeq) short-chain dehydrogenase TIC 32 B, chloroplastic-like isoform X2
KO
K11153
retinol dehydrogenase 12 [EC:
1.1.1.300
]
Organism
bna
Brassica napus (rape)
Pathway
bna01100
Metabolic pathways
bna01240
Biosynthesis of cofactors
Brite
Enzymes [BR:
bna01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.300 NADP-retinol dehydrogenase
106377123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
adh_short
adh_short_C2
KR
Epimerase
GDP_Man_Dehyd
NmrA
3HCDH_N
Sacchrp_dh_NADP
NAD_binding_10
FAD_binding_3
Pyr_redox
Motif
Other DBs
NCBI-GeneID:
106377123
NCBI-ProteinID:
XP_013672754
LinkDB
All DBs
Position
C3:399299..402142
Genome browser
AA seq
382 aa
AA seq
DB search
MKLFATYKYASLIVPYYSLTPLFLLSFSLSLSSILVPERQISENKEAKLLKMGLYSLITG
RRGPSGFGSATTAEEVTQGIDATHLTAIITGGAGGIGMETARVMAKRGVHVVIGARNIGA
AENGKAEILRQNTNARVTLLHLDLSSVKSIRAFVRDFHALHLPLNLLINNAGVMFCPYQL
SEDEIELQFATNHIGHFLLTNLLLDTMKTTAKTSGVEGRILNLSSIAHIYTYKEGIKFDS
INDICCYSDKRAYGQSKLANILHANELSRQLQEEGVNITVNSVHPGLILTNLFQHTALLM
RFLKFFSFYLWKNIPQGAATTCYVALHPTLKGVTGKYFADCNEVTPSKLARDETLAQKLW
DFSVKLINSVSKKNYLGFEDTI
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctttgccacttataaatatgcttctctcatagtaccatattattctctaaca
cccctcttccttcttagtttctctctatctctctcttccatattggttcctgagagacag
atctctgaaaataaagaggccaagctactaaaaatgggattatattcactaatcacaggg
agaagaggaccaagtgggtttggttcagctacaacagctgaagaggttacccaagggatt
gatgcaactcatctcactgcaattatcacaggaggggcaggagggataggaatggagaca
gcgagggtaatggccaagagaggggttcatgtggtaattggtgcccgaaacataggagct
gcagaaaatggcaaagccgagattctcagacaaaacacaaacgcacgtgtcaccctcctc
cacttagatctctcttcggtcaaatccatcagagcctttgttcgtgacttccatgccctc
catcttcctctcaatctcctcataaacaacgcaggagtaatgttctgtccataccaactc
tctgaagatgaaatcgaattgcagtttgctacaaatcacattggtcattttctgttgaca
aacttgctcctagacacaatgaagaccacagctaaaaccagtggtgtcgaaggaagaatt
ttgaatttatcatctatagctcatatctatacttataaagaaggaatcaagttcgacagc
atcaatgacatatgctgttactcggataaaagagcttacggacaatcaaaactagccaat
atattgcacgctaacgagctctcccgtcaacttcaggaagagggagtgaacataacagtg
aattcagtgcaccctggtctcatcctcaccaatctcttccaacacactgctcttttaatg
aggttcttgaagttcttcagcttttacttgtggaaaaatatacctcagggagcagctaca
acatgttatgttgctctgcatccaacgctgaagggagtaacgggaaagtactttgcagat
tgcaacgaagtcactccaagcaaacttgctagagatgagactttggcacaaaaactctgg
gattttagtgttaagctcatcaactctgtttctaaaaagaactacctgggtttcgaggac
accatttaa
DBGET
integrated database retrieval system
