KEGG   Brassica napus (rape): 106390128
Entry
106390128         CDS       T04128                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
bna  Brassica napus (rape)
Pathway
bna03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    106390128
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bna03021]
    106390128
Enzymes [BR:bna01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     106390128
Transcription machinery [BR:bna03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     106390128
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 CFAP77
Other DBs
NCBI-GeneID: 106390128
NCBI-ProteinID: XP_013685975
UniProt: A0A816L6S6
LinkDB
Position
C5:complement(45916630..45922246)
AA seq 1169 aa
MTDIDIEEIEAAGEVDLRDLGEPFLQSFCKKAATSFFDEYGLVSHQLNSYNFFIEHGLQS
VFESSGEMLVEPSFDPTKNKDHEWRYATVKFGEVSVDKPTLYSDDKELVFLPWHARLQNM
TYSARMKVNVDVEVFVKKVVKRDKFKTGQDEYVEKQILSKKTQDIPIGRIPVMVKSVLCN
TTEKGKNGESYRKGECAFDQGGYFVIKGAEKVFIAQEQICTKRLWISNSPWTVSYRSETK
RNRFIVRLSENQKAEDFKRKEKVLTVYFLSTEIPVWVLFFALGVASDKEAVDLIAFDGGD
ASITNSVVASIQEADSVCEDFRHGRNALAYVEQQIKGTKFPPGESVDECLSLYLFPGLKS
LKQKARFLGYMVKCLFSAYAGKRKCENRDNFRNKRIELAGELLERELRVHLAHARRTMTK
AMQRHLTGDGDLKPIEHYLDASIITNGLSRAFSTGAWCHPFRKMERVSGVVANLGRANPL
QSLIDLRRTRQQVLYTGRVGDARYPHPSHWGRVCFLSTPDGENCGLVKNLSLLGLVSTQI
MEPVVEELFDSGMEELVDDTSTPLSGKHKVLLNGDWVGVCSDSDYFVAELKSRRRQSELP
RQMEIKLDKDDKEVRIFTDAGRLLRPLLVVENLHKLKQSKPSKYTFEHLLDQGILELIGI
EEEEDCTTAWGTKQLLKQQKSYTHCELDLSFLLGVSCAIVPFANHDHGRRVLYQSQKHCQ
QAIGFCSTNPNIRCDTLSQQLFYPQRPLFKTMASECLQKDVLFNGQNAIVAVNVHLGFNQ
EDSIVMNKASLERGMFRSEQIRSYKADVDSKDSEKRKKMDEVVQFGKTHSKIGRVDSLDD
DGFPFVGANMHSGDIVIGRCTESGTDHSVKLKHTERGIVQKVVLSSNDDGKNYATVSLRQ
VRSPCLGDKFSSMHGQKGVLGYIEEQENFAFTNQGIVPDIVINPHAFPSRQTPGQLLEAA
LSKGIACPMQKKKGKSDAYSKVTRHATPFSTPSVDDITDQLHRAGFSRSGNERVYNGRTG
EMMRSLIFMGPNFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCL
IAHGASANLHERLFTLSDSSQMHICRNCKSAANVIERVASSGRRIRGPYCRLCESPDYVV
MVNVPYGAKLLYQELFSMGICLNFETNLC
NT seq 3510 nt   +upstreamnt  +downstreamnt
atgactgatatcgacattgaagagattgaggccgctggggaagtcgatttgcgcgaccta
ggagagccgtttctccagagcttctgcaagaaagctgcgacgtccttcttcgacgagtac
ggcctcgtcagccaccagctcaactcctacaacttcttcatcgagcacggccttcagagc
gtgtttgagtcctccggtgagatgctcgttgagccgtcctttgaccctacgaagaacaag
gaccatgagtggagatacgccacggtgaagttcggagaagtcagcgtggataagcctact
ttgtactccgatgataaggagcttgtgtttctcccgtggcacgctaggcttcagaacatg
acttactctgcgaggatgaaagttaatgtcgatgttgaggtgttcgttaagaaagtcgtt
aaaagagacaagttcaagacgggacaagacgaatacgtcgaaaagcagatcttgtctaag
aagacgcaggacatcccaattggtaggatacccgtgatggtgaaatccgttctttgcaac
acaacggagaagggaaagaatggggaaagctacagaaagggggagtgtgcatttgaccag
ggtggatactttgtgataaaaggagctgagaaggtctttattgctcaagaacagatatgc
acaaagagactttggatttctaattcaccatggaccgtctcctacaggtccgaaaccaaa
aggaatcgtttcattgtgcgtctatcagagaatcagaaagctgaagactttaagagaaag
gagaaagtactgacagtgtacttcctgtcaactgagatcccagtctgggtcctgttcttt
gcgctgggtgttgcgtcagacaaagaggctgtagatctaattgcttttgatggtggtgat
gcaagtattaccaacagcgtcgtagcttcgatccaggaagctgattcggtttgcgaagat
tttcgccatgggaggaatgctctggcatatgttgaacagcagataaaaggcacaaaattc
ccacctggtgagagtgtggatgaatgcctaagtctgtacctgtttccaggcctcaagagt
ttgaagcagaaagcacgattcttgggctacatggtgaaatgcctttttagcgcatatgct
gggaaaagaaagtgtgagaacagagacaactttaggaacaagaggatcgaactagctgga
gagctgctggaaagggaactaagggtgcatttggcgcatgctagaaggacaatgaccaaa
gccatgcagagacacctaacgggcgatggtgatctgaagcctatcgagcactacttggat
gcttccattataacaaatggacttagtagagccttctccactggagcatggtgtcatcct
ttcaggaagatggaaagggtttcaggtgttgtcgctaatctgggtcgtgcaaatccactc
cagagtttgattgatctgaggagaacgcggcaacaggtcctgtataccggcagagttgga
gatgctagatatccgcatccctctcactggggcagagtatgctttttgtcaaccccagat
ggcgaaaattgtggtcttgtgaagaacctgtctctccttggacttgtcagcactcaaatt
atggagcctgtggtggaagaactcttcgatagtggaatggaagagctggtggacgatacc
agtacaccactgagcgggaagcacaaggttctcctcaatggagactgggttggagtatgt
tcagattctgactactttgttgcggagttaaaaagcaggcggcgtcaaagtgaactacct
cgtcagatggaaattaagctagataaagatgacaaggaggtgaggatttttactgacgca
ggcagacttctccgacccctcttggttgttgaaaatctccacaagttgaagcaaagtaaa
ccatcgaagtacacctttgagcatcttcttgaccaagggattctcgagctgatcgggatt
gaggaagaagaagactgtaccaccgcatggggaaccaagcagcttctgaaacagcagaag
agttacactcattgcgaactggatttgtccttcctgttgggtgtgagctgtgcgattgtg
ccatttgcgaaccatgatcatggtagaagagttctctaccagtcccagaagcattgccag
caagccattgggttctgctcaacgaaccctaacatccgctgtgatacgctgtcccagcag
ctgttctatccccagcggccgcttttcaagacaatggcgtcagaatgtcttcagaaggat
gtgttgttcaatggacagaacgcgatagttgctgtgaatgttcatcttgggttcaaccaa
gaggactccattgtcatgaacaaagcttcgctggaacgtgggatgttccgttcagaacag
atcaggagctataaagcagacgtcgacagtaaagactcggagaagaggaaaaagatggac
gaggttgttcagtttggaaagacccacagcaaaatcggcagagtagacagcctggatgat
gatgggttcccttttgttggtgctaacatgcacagtggtgatatcgtcattggcagatgc
accgagtctgggactgatcacagcgtgaaactgaagcacactgagagagggatagtgcag
aaggtggttctatcatccaatgacgatgggaagaattatgctactgtttctctgagacag
gttcgttctccatgtcttggagataaattctccagtatgcatggccagaagggtgtttta
ggctatatagaggagcaggagaattttgctttcacgaatcaaggcatagttcctgatatc
gtgatcaatccgcatgcattcccttctcggcaaacaccgggccaactcttggaggctgct
ctgtccaaaggaatagcttgtcctatgcaaaagaagaagggcaagtctgatgcatactcc
aaagtgacacgccatgccactcctttctccactcccagtgtcgatgacataaccgaccag
cttcacagggctggcttttcaagatcgggaaacgaaagggtctacaatggaagaacagga
gagatgatgcgttcactcatcttcatgggcccaaatttctaccagcgactcatccacatg
tccgaggacaaggtcaagttcaggaacaccggaccagttcacccactcacgcgccagcca
gttgcagacaggaagaggttcggtggaatcaagttcggagagatggagcgagactgcctg
attgctcacggtgcatcagcgaacttgcacgagcgtctgttcactctgagtgactcttca
cagatgcacatctgcaggaactgtaaaagcgcagcgaacgtgatcgagagggtggcgagc
agtggaagaaggatcagaggaccgtattgcaggctgtgcgagtctccggactatgtggtg
atggtgaatgtgccgtatggagcgaagcttctgtatcaggagctgttcagtatgggcatc
tgtctcaacttcgaaaccaacctctgctga

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