Brassica napus (rape): 106400945
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Entry
106400945 CDS
T04128
Name
(RefSeq) probable acyl-CoA dehydrogenase IBR3
KO
K00249
acyl-CoA dehydrogenase [EC:
1.3.8.7
]
Organism
bna
Brassica napus (rape)
Pathway
bna00071
Fatty acid degradation
bna00280
Valine, leucine and isoleucine degradation
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
bna01212
Fatty acid metabolism
Module
bna_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
bna_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
106400945
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
106400945
Enzymes [BR:
bna01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.7 medium-chain acyl-CoA dehydrogenase
106400945
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Gene cluster
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Motif
Pfam:
APH
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA_dh_N
Kdo
EcKL
RIO1
Motif
Other DBs
NCBI-GeneID:
106400945
NCBI-ProteinID:
XP_013696807
UniProt:
A0A816LPZ7
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Position
C5:complement(53727703..53732772)
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AA seq
819 aa
AA seq
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MGSNTGDLVTRVQSAHLFDHDALLRYAADNVSGFPTNPSQFTISQFGHGQSNPTFLIAVG
SGSSLKRYVLRKKPPGKLLQSAHAVEREFQVLKALGEHTQVPVPKVFCLCTDPTVIGTAF
YIMEFMEGRIFIDPKLHNVAPERRTAIYRAAAKALASLHSADVDAIGLGKYGRRANYCQR
QIDRWFKQYLASTSEGKPVRNPKMFELVDWLRKSIPAEDSTGATSGLVHGDFRIDNLVFH
PYEDRVIGILDWELSTLGNQMCDVAYSCMHYIVNVQLDKEHVSEGLETTGLPDGILSMPE
FLLEYCSALGKPWPAANWKFYVAFSMFRAASIYTGVYNRWLMGNASAGERARNTGVQANE
LVECALGYIARENVLPAHPPSGKRDESPSYESLVDGTGRFVPNRKVLELRGKLIKFMETH
IYPMEKEFAKLAQSDLRWTVHPEEERLKEEAKRQGLWNLFIPVDSAARARRELAAIENKQ
SFDQLFGEGLTNLEYGYLCEIMGRSVWAPQVFNCGAPDTGNMEVILRYGNKEQIAEWLIP
LLEGKIRSGFAMTEPQVASSDATNIECSIKRQGDSYIINGTKWWTSGAMDPRCRVLILMG
KTDFNAPKHKQQSMILVDMRTPGIHVKRPLTVFGFDDAPHGHAEISFENVIVPAKNILLG
EGRGFEIAQGRLGPGRLHHCMRLIGAAERGMELMAKRALSRKTFGMFIAQHGSFVSDLAK
LRVELEGTRLLVLEAADHLDKFGNKKARGILAMAKVAAPNMALKVLDTAIQVHGAAGVCS
DTVLAHLWATARTLRIADGPDEVHLGTIGKLELQRASKL
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggggagtaacaccggcgatctagtgacacgtgtccaatcagctcatctgttcgatcac
gacgccttgctccgttacgccgccgacaacgtctccggttttccgaccaacccatctcaa
ttcaccatctcacagttcggacacgggcaatcgaatccgacctttctgatcgctgtcggc
tcgggaagctcccttaaacgctacgttttgaggaagaaacctcctgggaagctcttgcaa
tctgctcatgccgttgaaagggagtttcaggtgcttaaggctcttggtgagcatacacag
gttcctgtccccaaagtcttctgcttatgcactgaccccactgtgattgggactgctttt
tacattatggagtttatggaaggaagaatcttcatagaccccaagttgcataatgtagcg
ccagagagaagaactgcgatctatcgtgcagccgccaaagccttagcttctcttcattct
gctgacgtggatgcgattggtcttggcaaatacggtcggcgcgctaactactgccaaaga
cagatagataggtggttcaaacagtacttggcttcaacgagcgaaggcaaacccgtaagg
aatccaaagatgtttgagcttgttgattggttacgcaaaagcatacccgctgaagattca
acaggggcaacgtcaggccttgtacacggagacttccgcattgacaatctagtgtttcat
ccttatgaggatcgagttattggaatacttgactgggaactgtccacgcttgggaaccaa
atgtgtgatgttgcatatagctgcatgcattacattgtgaatgttcagctcgataaggag
catgtgagtgaaggtcttgaaactaccggactcccagacggaatactttctatgccagag
tttcttttagaatactgttctgcactggggaaaccatggcctgctgcaaactggaagttc
tacgtagccttctctatgtttcgggctgcttcaatctacacaggcgtatacaacagatgg
ttaatggggaatgcttcagccggtgaacgtgccaggaacacaggggttcaagccaatgag
cttgtagagtgtgccttgggttatatcgcacgcgagaatgttcttcctgcgcaccctcca
tctggtaaaagagatgagagcccatcgtatgaaagccttgtggatggaaccgggagattc
gttcccaacagaaaagtattggagctaaggggaaagttgatcaagtttatggagactcac
atctacccgatggagaaagagttcgccaaacttgctcagtcagatttgcggtggaccgtt
caccctgaggaggagaggttaaaggaagaggcaaagagacaaggcttatggaacttattt
attcctgtggatagtgctgctagagctagaagagaactggcagctattgagaataaacaa
tcttttgatcagttgtttggagaggggctaacgaacctggagtatggttacctttgtgag
atcatgggtcgttcggtttgggctccacaggtgttcaactgtggtgcacctgatactgga
aacatggaggtgatacttcggtatggaaacaaagaacaaattgctgaatggctgattccg
ctgcttgaaggaaagatccgttctggatttgctatgactgagccacaagttgcatcgtct
gatgcaaccaatattgagtgctctattaaaagacaaggtgattcatacatcatcaatggc
acaaaatggtggacaagtggagccatggatccaaggtgcagagtgcttattctcatggga
aaaactgatttcaacgccccaaaacataagcaacagtctatgatactagtggacatgcgg
actccaggtatacacgtgaagagacctctcacggtgtttggttttgacgacgcgcctcat
ggacatgctgagatttcttttgagaatgtgattgtcccggcgaagaatattctcctagga
gaaggccgaggattcgagattgctcagggaaggttaggccctggaagattgcaccattgc
atgagactaataggtgcagcagagcgtgggatggagctaatggctaaaagagctcttagc
aggaagacttttgggatgtttatagcgcagcacggttcttttgtctctgatcttgcaaag
ttgcgagtagagctggaaggaaccagattgttagtactagaagctgctgatcatctcgat
aagtttgggaacaaaaaagctagagggattctcgcaatggccaaggttgcagctccaaac
atggcgttgaaggtactagacacggctattcaagttcatggagcagccggtgtgtgctcg
gatacagttttggcgcatctgtgggccacggctagaacgctcaggattgctgatggacct
gacgaggttcatcttgggaccattggcaagttagagttacagagagcttcaaagctttaa
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