Brassica napus (rape): 106413977
Help
Entry
106413977 CDS
T04128
Name
(RefSeq) citrate synthase 2, peroxisomal
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
bna
Brassica napus (rape)
Pathway
bna00020
Citrate cycle (TCA cycle)
bna00630
Glyoxylate and dicarboxylate metabolism
bna01100
Metabolic pathways
bna01110
Biosynthesis of secondary metabolites
bna01200
Carbon metabolism
bna01210
2-Oxocarboxylic acid metabolism
bna01230
Biosynthesis of amino acids
Module
bna_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bna_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
bna_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
106413977
00630 Glyoxylate and dicarboxylate metabolism
106413977
Enzymes [BR:
bna01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
106413977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
Motif
Other DBs
NCBI-GeneID:
106413977
NCBI-ProteinID:
XP_048609678
LinkDB
All DBs
Position
C4:32076425..32084248
Genome browser
AA seq
470 aa
AA seq
DB search
MERGIARLAVLSAHLEVSDQVLPPPIEPWCTSGASAPHGSLKGSLTIVDERTGKKYQVPV
AEDGTVKSIDLKKITTGADDKGLKLYDPGYLNTAPVRSSISYTDGDEGILRYRGYPIEEL
AESSTFLEVAYLLIYGNLPSQRQLADWELAISQHSAVPQGLLDMIQSMPQDAYPTGAFVS
AMSALSLFHPDANPAHMGQDVYKSAQVRDKQIFRILGQASTIAAAAFLRTAGKPHVLPLS
NLSYTENLLYMLNSMGNRFYKPNPRLARVMDTIFILHCEHEMNCSTAAARHLSSSGVDVY
TAIGGATGAINGPLHGGAVEAVPKMLSEIGSVENIPEFIECVKNKKRKLSGFGHRVYRNY
DPRAKVLKKLADEVFSIFGKDPLFEVAAALEKTALTDEYFVKRKLYPNVDFYSGLVCRVM
GVPSHFIIVSRIAGYLSHWRESLDDPDTKIMRPQQAYNGVWLRHYEPVRE
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggagagggggattgctcgcttggccgttctctctgcgcacttggaggtgtctgatcag
gtgttaccgccaccgatcgagccatggtgcacatcgggtgctagtgcaccgcatggatcc
cttaaaggaagcttgaccatcgtcgatgagcgcacgggaaagaagtaccaggtcccagtc
gcagaggatggtaccgttaaatccatcgatcttaagaagataacgacgggggcggatgac
aaggggcttaagttatacgatcctggttacttaaacacagctcctgttcgatcttcaatt
tcttacactgatggagatgaaggaatcctacgttataggggatacccaattgaagagttg
gctgagagtagtacttttctcgaggttgcttatctcctcatttatggaaacctgccttct
caaagacagctagctgattgggaattagcgatctctcagcattcagctgtcccacaagga
ttattggatatgattcagtccatgcctcaagatgcatatccaacgggtgcctttgtcagt
gcgatgagtgcactttctctctttcatcctgatgcaaaccctgctcatatgggccaggat
gtttacaagtcagcacaagttcgtgataaacagatatttcgtattcttggacaggcatct
acaattgcagcagctgcttttttgaggacagcagggaagcctcatgttcttcctttgagc
aacctttcttatacagagaacttactctatatgctgaactcaatgggaaataggttttac
aagcctaatcctcggctagctcgagtgatggacaccatcttcatactgcattgtgaacat
gaaatgaattgctccactgctgctgctcggcatctttcctctagtggtgttgatgtgtac
actgctattgggggagctactggagccattaatggtccgcttcatggtggtgcagttgag
gctgtgcctaagatgttatcagagattgggagtgttgaaaatattccagagttcatcgaa
tgtgtgaagaacaagaagaggaagctgtcaggttttgggcaccgcgtttacagaaactac
gacccaagagcaaaagtccttaagaaactggcggatgaagtattctccatctttggaaag
gatcctctctttgaggtagcagctgctcttgagaagacggcgctcactgatgaatatttt
gtcaagagaaagctttacccaaatgttgatttctactctggattagtctgtagggtaatg
ggagtcccatcacatttcatcatagtctcgcgtattgctggatacttgtcacactggcgt
gagtcattagatgatcctgacactaagatcatgaggccccagcaggcctataatggagtg
tggctaaggcattacgagccagtgagagaatga
DBGET
integrated database retrieval system