Brassica napus (rape): 106421942
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Entry
106421942 CDS
T04128
Name
(RefSeq) autophagy-related protein 13a isoform X1
KO
K08331
autophagy-related protein 13
Organism
bna
Brassica napus (rape)
Pathway
bna04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
106421942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106421942
03029 Mitochondrial biogenesis [BR:
bna03029
]
106421942
Membrane trafficking [BR:
bna04131
]
Autophagy
Autophagosome formation proteins
ULK complex
106421942
Atg1 complex
106421942
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
106421942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
106421942
NCBI-ProteinID:
XP_013718223
LinkDB
All DBs
Position
C3:complement(42248243..42250777)
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AA seq
585 aa
AA seq
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MDFPENLPSPDIGRLEQIVSHFFPKALHIVLDSRIPSLQSRGRTRDRSSGGLNVKKSDKW
FNLIMGDRPAALDKLHSWHRNILDSMIIDIILIHPTDDDDDHGNVRSAETVIERWVVQYE
NPLIMSPQTSDPSTRYQKVYKKAIILLRSLYAQTRLLPAYRVSRQLSSSLASSRYEMVYK
VSSFSDVFSPPVTETMKEFRFSPVEVPPGRLCASVTYRSDLSDFNLGAHITLPPRIITDY
VGSPATDPMRFFPSPGQSFEATSFHFQGRAGRPPLTTSSASERPHSWTSGFHRPPTPNQS
FSPDFHWSRTDGGDSHHQLSPPFSPSGSPSTPRGSYSPRINVRPGTAPVTIPSSATFNRY
VSSNFSEPSRNPLPPFSPKSTRRSPSSQDSLPGIALYKSSRSGESPSGLINHYPGHKLTK
DSKYDSGRFSGLLSSSGSPRFGFSRSPSRLSSDLEDPDCSCPFDFDDVDESVLQYRLKCQ
SLDRRKTSSSISQSLPIGRKSQDAAVGVLVQMLKTAPPLRQDSSTYMASSMSGVQREGSS
VSGAESEFSMARSTSDALEELRNYKQLKDLLLSKSKSVGGATRVH
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggattttcccgagaatctgccatcaccagacataggaagattagagcagatcgtatct
cacttcttcccgaaggcactgcacatcgtcctcgactccagaatcccttccttgcaatcc
cgtggccgtactcgcgaccgttcatcgggtggtctcaacgtcaaaaagagcgataaatgg
ttcaatctcataatgggagaccgtcccgcagcgttagacaagttacattcttggcatagg
aacatcttggattcgatgatcatcgacatcatcctcatccatcccactgacgatgatgat
gatcatggcaatgtacgatctgccgagactgtgatcgagcgttgggttgttcaatacgag
aatccgttgatcatgtcccctcaaacctctgatccttccactcgttaccagaaggtttac
aagaaagctatcattctgctgcgttctctctacgctcagactcggcttttgcctgcctac
cgtgtctccaggcagctgagttcgtctcttgcgtcttcccggtatgaaatggtctacaag
gtttcgtctttcagcgatgtcttctctcctcccgtgactgagaccatgaaagagtttcgc
ttttctcctgttgaagtgcctcctggtcgtctctgcgcatctgttacttaccgttctgac
ttgtctgacttcaatctcggtgctcacatcacattgcctccgaggatcataaccgattac
gttgggagtcccgccacggatcctatgaggttcttcccttctccagggcagagctttgaa
gctacttcttttcattttcaaggtagagctggacggcctccgttgactactagctcagct
tctgaacgtccccatagctggaccagtggctttcacagacctcctaccccaaaccaatct
ttctcccctgatttccactggtcccgtactgatggtggtgacagtcaccaccagctttct
cctcccttttcgccatcaggttctccttctactccaagagggagttacagtccaaggatt
aatgtgaggcctggtactgctccagtgaccattccttcttcagctacgttcaatagatac
gtttcatctaacttctctgagccaagtaggaatccactccctcctttttcccctaaaagc
accagacgctccccttcatcgcaggactctctgcctgggattgctttgtacaagagttcg
agaagcggagaatctccttctggactaattaaccactaccctggccacaagctgacaaag
gacagcaaatacgattcaggccggttctctggactgctctcttcaagtggctcaccaaga
ttcggcttttctaggagcccgagtagattatcttcggatttggaggaccctgattgttca
tgcccttttgatttcgatgatgttgacgagtctgtactccagtacaggttaaaatgccaa
agtcttgaccggaggaaaacttcaagctctatatcacagtcgctacctatagggaggaag
tcacaggacgcagcggttggagtcctggttcagatgctaaagacagcaccgccattacga
caagactcaagcacttacatggcgtcatcaatgtctggtgttcagagagaaggtagttca
gtgtcaggtgcagaatctgaattttcgatggctcgaagtacatcagatgcactagaggag
ctcagaaactacaagcagctcaaagacttgcttctctccaaatccaagagtgttggagga
gcaactcgtgtccactga
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