KEGG   Brassica napus (rape): 106438661
Entry
106438661         CDS       T04128                                 
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic
  KO
K13789  geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
bna  Brassica napus (rape)
Pathway
bna00900  Terpenoid backbone biosynthesis
bna01100  Metabolic pathways
bna01110  Biosynthesis of secondary metabolites
Module
bna_M00366  C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:bna00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    106438661
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:bna01006]
    106438661
Enzymes [BR:bna01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     106438661
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     106438661
    2.5.1.29  geranylgeranyl diphosphate synthase
     106438661
Prenyltransferases [BR:bna01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   106438661
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-GeneID: 106438661
NCBI-ProteinID: XP_013735362
LinkDB
Position
A1:174587..176138
AA seq 322 aa
MVLSASGSPLRFGGHVPEKPCRMRMKQAIRSSSSNNFDLRTYWTTLITEINQKLDEAIPV
KYPAGIYEAMRYSVLAKGAKRAPPVMCVAACELFGGDRLAAFPTACALEMVHAASLIHDD
LPCMDDDPVRRGKPSNHTVFGADMAILAGDALFPLGFQHIVSLTPPHLVPRSTILRLISE
IARTVGSTGMAAGQYVDLEGGPFPISFAQEKKFGAMGECSAVCGGLLGGATDDELQSLRL
YGRAVGMLYQVVDDIRDDDKKKKKKKSYAGVFGSERAMEMADELSVKAKKELQVFDKYGD
ASVAPLYSFVDYAAHRDFLLHV
NT seq 969 nt   +upstreamnt  +downstreamnt
atggtgttaagcgcttcagggagtcctctccgatttggtgggcatgttcccgagaaaccc
tgtcgtatgcgcatgaaacaagcaattcgatcatcatcgtccaataacttcgatctgagg
acgtattggacaaccctaataacggagatcaaccagaagctggacgaagcgataccagtc
aagtaccctgcagggatctatgaggcgatgagatactcagtcctcgctaaaggcgccaag
cgtgcccctcctgtaatgtgcgtggccgcctgcgagctcttcggtggcgatcgactcgcc
gctttccccaccgcatgtgcccttgaaatggtccacgcggcttcgctgattcacgatgac
ctcccctgtatggacgatgatcctgtccgcagaggaaagccatctaaccacactgtcttc
ggcgctgacatggccattctggctggtgatgccctcttcccgctcggcttccagcacatt
gtctctctcacccctccccaccttgttccccgatccaccatcctccgtctcatctccgag
attgcccgcaccgtcggctccaccggcatggctgcagggcagtacgttgacctcgaagga
ggcccctttcctatttcctttgctcaggagaagaaattcggagccatgggggagtgctct
gccgtctgtggaggtctcttgggtggtgccactgacgatgagcttcagagtctcagattg
tacggcagagctgttgggatgctgtatcaggtggtggatgacatcagagacgacgacaag
aagaagaagaagaagaagagctatgcgggagtctttggttccgagagggcaatggaaatg
gcagatgagcttagtgtaaaggccaagaaggagctgcaagtgtttgacaagtatggagac
gcatccgttgctcctctctacagtttcgttgactacgctgctcaccgagacttcctcctt
catgtctga

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