KEGG   Brassica napus (rape): 106447548
Entry
106447548         CDS       T04128                                 
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
bna  Brassica napus (rape)
Pathway
bna03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bna00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    106447548
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bna03400]
    106447548
Enzymes [BR:bna01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     106447548
DNA repair and recombination proteins [BR:bna03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     106447548
SSDB
Motif
Pfam: Exo_endo_phos SAP Exo_endo_phos_2 DUF2458 PPP4R2
Other DBs
NCBI-GeneID: 106447548
NCBI-ProteinID: XP_013744950
LinkDB
Position
A4:20297579..20300660
AA seq 489 aa
MNKVLQLGLQSSVVQAAKFLVVVPFRSLRFGSSIVSVRVGTSSFNKRLMSNATSKSVPLS
INNSKGKPMKRSDNDIEAMTVQELRATLRKLGLPVKGLKKELISTLKLHMDNSSQDESSG
AEKMETTSSTLSESVTIKRKTRNQEEADDDYYGNDNGEKKVKQSTEKNLKVKVSSKEEEA
SLTIVVSSSNQSEPWTVLAHKKPEKDWKAYNPKTMRPPSLPEGTKSVKIMTWNVNGLRAL
LKLESFSALQLAQREDFDVLCLQETKIQVKDVEEIKKALIEGYDHSYWSCSVSKLGYSGT
AIISRIKPLSVRYGTGLSGSDHDTEGRIVTAEFESFYLINTYVPNSGDGLKRLSYRVEEW
DRTLSNYIKELEKTKPVVLTGDLNCAHEEIDIYNPAGNKRSAGFTIEERQSFGENFLEKG
FVDTFRKQHPGVVGYTYWGYRSGARKTNRGWRLDYFLVSESIAGNVHDSYILPDISGSDH
CPIGIILKL
NT seq 1470 nt   +upstreamnt  +downstreamnt
atgaacaaggttcttcagttaggtctccagagctccgtcgtccaagccgccaagtttctg
gtggtggtgccctttaggagcttaagatttggttcatcaatcgttagtgttagagtagga
acaagcagtttcaacaagaggcttatgtcaaatgctacatcaaagtctgtacctttatcc
atcaacaacagcaagggaaagccaatgaagcgaagtgataatgacattgaggcaatgacg
gttcaagaacttagagccacattgaggaaacttggactacctgtgaagggactcaaaaag
gaacttatctcaactttaaaacttcatatggacaacagttcacaagatgaaagttctggt
gcagagaaaatggagaccacttcatccaccctttcagagagtgtcactatcaaaagaaaa
accagaaaccaggaagaggctgatgatgattattatggcaatgacaatggagagaagaaa
gttaaacagtccactgagaaaaacttgaaagtgaaagtttcttcaaaagaggaagaagca
tcactgaccattgtcgtctcatcctccaatcaaagtgaaccgtggacggtacttgctcat
aagaagcctgagaaagactggaaagcttataacccaaagacaatgagacctccttctcta
ccagaaggcaccaagtctgtgaagattatgacttggaatgttaatggactgagagcattg
ttgaagttagagagcttctctgctcttcagcttgcacaaagagaagatttcgatgtgttg
tgcttgcaggagactaaaatccaggtgaaggatgttgaggagatcaagaaagcacttatt
gaaggctatgatcatagttactggtcctgcagcgtctcaaaacttggttactctggaact
gctattatctcacggataaaaccactctcggttagatatggtactggtctatctggatca
gaccatgacacggaaggacgcattgtgactgcagagtttgaatcattctacttgataaac
acttatgttcctaactctggagatggcttgaaaagactgtcatacagggttgaagaatgg
gatcgaaccctcagcaattacatcaaagagctggagaagactaaacctgtagtcttgact
ggtgatctaaactgtgctcatgaagaaatcgacatctacaatcctgcggggaacaaaaga
agtgctggtttcacaatagaagaaagacaatcatttggagaaaacttcttggagaagggc
tttgtggatacttttagaaagcagcatcctggtgttgttggttatacttattggggttat
cgcagtggtgcacgcaaaaccaatagaggatggagactggactacttcttggtgtctgaa
tcgattgcaggcaatgtccatgattcttacattctccctgatatcagtggcagtgatcat
tgccccattggcattattctcaagctctga

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