Brassica napus (rape): 106451932
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Entry
106451932 CDS
T04128
Name
(RefSeq) autophagy-related protein 13b-like
KO
K08331
autophagy-related protein 13
Organism
bna
Brassica napus (rape)
Pathway
bna04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
bna00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
106451932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bna04131
]
106451932
03029 Mitochondrial biogenesis [BR:
bna03029
]
106451932
Membrane trafficking [BR:
bna04131
]
Autophagy
Autophagosome formation proteins
ULK complex
106451932
Atg1 complex
106451932
Mitochondrial biogenesis [BR:
bna03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
106451932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
106451932
NCBI-ProteinID:
XP_013749376
UniProt:
A0A816TJZ4
LinkDB
All DBs
Position
A5:21779163..21781976
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AA seq
601 aa
AA seq
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MNRSSNSEGAKAEQIIFEFFAKTLDIILESRTPFMSSRNFSSSGEQMISSPSSSSSSSSS
VRPRDKWFNLALRECPAALESFDIGRRSTLEPLVVDVVLVARPFDQMNSPGGRELIRNFS
GKEYHSDQDDRETKNKQIIERWVVQYDNRKVRERRSSSNNNNNNKLQVMYKKATLLLRSL
FVMVRLLPAYKIFRELNSSGQIFKFKLVPKVPTIVEPFTRREEGEMQKFAFTPVDTICGR
LCMSVLYRSLSDVSCSQHSAPVSPTFITDYVGSPLADPLKSFPSLPLSYGSPPLMSFQRR
HSWSFDRYKASPPSVSCSPSPTRSDSQALVTNHCSRRLPPHPCDITTGRRKESYAEECLQ
NFSPPCSPSAPTQAVPRSITRTESAPVRIPPPSFEAKQNVVVPPSSHLKLSRHTSLRPVR
NTGPVESGVRLSSNSSPRISFSKSSSRSYQDDFDDIDFPCPFDVEYDEITDPSSSRPGSF
EQRGDAHEAPPPPPFESSGSYPKKSQDAAVGALVNMLKKAPPLRQDVSETSIPELCWNNN
KNKPGGGQEIATASMTASGIALAAKTTADALEELRSYKEMKNVLLSQSTNASSSPFAVSE
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggagtagcaactccgaaggtgctaaagcagagcagatcatattcgagttcttc
gccaaaaccctcgacatcatcctcgaatcaaggactcctttcatgtcttcaagaaacttc
agtagtagcggcgagcagatgatctcctcaccttcctcatcttcttcgtcttcctccagc
gtcaggcctcgtgacaaatggttcaacctagctctcagggagtgtcctgcagcgttagag
agcttcgacatcggccgcagaagcacgctagagcctctggttgttgatgtggttcttgtc
gcaagaccatttgatcagatgaattctccaggtgggagagagcttatcaggaacttctcc
gggaaagagtatcactctgatcaagatgatcgtgaaaccaagaacaagcagatcattgag
agatgggttgtgcagtatgataacaggaaggttagagaaaggaggtcaagtagtaataat
aataataataataagttgcaagtgatgtataagaaagcaactttgcttctgagatcactc
tttgtgatggttaggcttttaccagcttacaagatcttcagagaactcaactcatctgga
cagatcttcaagttcaagcttgtccctaaggttccaaccatagttgagccatttactcgt
agagaagagggagagatgcagaagttcgctttcacacctgttgataccatctgcggtagg
ctttgcatgtctgtgttgtatcgatctctctcggatgtcagttgcagccagcactcagct
cctgtgtctccgacctttattactgattacgttggaagtcctttagctgatcctttgaaa
agcttcccttctttgcctctttcttatggctcgccgccgttgatgtcgtttcagaggcga
catagttggagttttgataggtacaaggcctctccaccttcggtttcttgctcaccgtcg
cctacacggtctgattcacaagcgttggttactaatcattgttctcgtcgccttcctcct
catccttgtgatataactactggtcgtaggaaggaaagctatgctgaagagtgtttgcaa
aatttttctcctccttgttctccttcagcacctacacaagccgtcccaagaagcatcacg
cgtactgaaagtgctccagttaggattccacctcctagttttgaggctaaacagaacgtg
gtggtgccaccttcttctcatttgaaactgtcgagacacacttctctgaggcctgtgaga
aacactggtcctgttgaatctggggtgaggctatcttcaaacagctcaccgaggatatca
ttttctaaaagttcaagtagatcataccaagatgattttgatgatattgacttcccttgt
ccatttgatgttgagtatgatgagattacagatcctagtagtagcagaccaggctccttt
gaacagagaggagatgcacatgaagcaccaccaccaccaccatttgagtcgagcggttca
tacccaaagaagtcacaagatgctgcagttggtgcacttgtgaatatgctgaagaaagct
ccacctctcagacaagacgtctctgaaacttccatacctgaactttgttggaacaacaac
aagaacaaacctggagggggtcaggagatagcaacagcgtctatgacagcgtcagggata
gctctggcggcaaagacaacagccgatgccttggaagagctgaggtcttacaaagaaatg
aagaatgtgttgcttagccaatccacaaatgcttcgtcctcaccctttgctgtttcagaa
tcttga
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