Brassica napus (rape): 111198850
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Entry
111198850 CDS
T04128
Name
(RefSeq) cell division control protein 48 homolog D
Organism
bna
Brassica napus (rape)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
CDC48_2
AAA_5
AAA_22
AAA_14
AAA_33
TIP49
RNA_helicase
AAA_28
AAA_18
nSTAND3
Parvo_NS1
Mg_chelatase
ATPase_2
IstB_IS21
Bac_DnaA
AAA_17
AAA_25
AAA_24
Viral_helicase1
AAA_7
DUF815
NACHT
ABC_tran
Vps4_C
TsaE
NB-ARC
Zeta_toxin
Sigma54_activat
SLFN-g3_helicase
Rad17
Molydop_binding
UFD1
Motif
Other DBs
NCBI-GeneID:
111198850
NCBI-ProteinID:
XP_022543901
LinkDB
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Position
A9:33887710..33894325
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AA seq
811 aa
AA seq
DB search
MRNQAGSSDSKGTKKDFSTAILERKKAANRLVVDEAINDDNSIVYLHPETMEKLQLFRGD
TVLIKGKKRKDTVCIALPDDTCEEPKIRMNKVVRSNLRVRLGDVISLHQFPDVKYGNRVH
VLPIDDTIEGVTGNIFDAYLKPYFLEAYRPVKKGDLFLVRGGMRSIEFKVIETDPAEYCV
VAPNTEIFCEGEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGTGKTLLARAVANETGAFFLCINGPEIMSKMAGESESNLRKAFKEAEKN
APSIIFIDEIDSIAPKRDKTNGEVERRIVSQLLTLMDGLKARAHVIVMGATNRPNSIDSA
LRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERASKDTHGYVGADLAALCT
EAALQCIREKMDVIDIEDEEIDAEILNSMAVTNEHYLTALGNSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQI
FKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIRENIEKDIEKERKRAEA
PEAMEEDEEEIADIKAGHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPQV
TGAGAAATTAGGADPFATTGGAAAEDDDLYS
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatcaagctggttcatctgattcgaaggggacgaagaaagattttagcaccgcg
attctggagcggaagaaggcggcaaatcgtttggtggtggatgaggccatcaacgatgac
aactccatcgtgtatctacaccctgagaccatggagaagctacagctcttccgtggagat
accgtgttaatcaagggaaagaagaggaaggatactgtgtgtattgccctacctgatgat
acatgtgaggagccaaagattaggatgaacaaagttgtcaggtctaaccttagggttagg
cttggagatgttatatctcttcaccagttccctgatgtcaagtatgggaatcgtgttcac
gttttgcccattgatgatactattgaaggagttactggcaatatatttgatgcatacctt
aaaccttatttcttggaggcataccgtccggtgaagaagggtgatcttttcttggttaga
ggagggatgagaagcattgagttcaaggttattgagaccgatcctgctgagtactgtgtt
gtggctccgaatacagagatattctgtgaaggtgaaccgataaagagagaggatgaggag
aggttggatgaagttggttacgatgatgttggtggtgtcaggaaacaaatggctcagatt
agagagcttgttgagcttcctttgaggcatccacagctctttaagtccattggtgttaaa
cctcccaagggaatcttgctctatggccctcctggcactgggaagacactacttgctcgt
gctgttgctaacgagaccggtgcgtttttcttgtgtatcaatggtcctgagatcatgtcc
aagatggccggtgagagtgagagcaaccttaggaaagcgtttaaggaagctgagaagaat
gcgccttcgattattttcattgatgagattgattctattgctccgaagagagacaagaca
aacggagaggttgagagacggattgtttctcagctcttgacgcttatggatggtcttaaa
gctagagctcatgtcattgttatgggagcgaccaacaggcctaacagcattgactcggct
ttgagaaggtttggacgttttgacagggagattgatattggtgttcctgatgagattggt
cgtcttgaggttctcaggattcataccaagaacatgaagcttgctgaagacgttgatttg
gaaagagcatccaaagacacacacgggtacgttggtgcggatcttgcagcgttatgcact
gaagctgctctccagtgcatcagagagaagatggatgtgattgacatagaagacgaagag
atagatgctgaaattctcaattctatggctgtgactaatgagcattacctgacagccctt
ggtaacagcaatccttctgctctacgtgagacggtcgtcgaggtgcctaatgtttcttgg
gaggacattggtggtcttgagaatgtcaagagggaactacaagagactgttcaatatcca
gtggagcatcctgagaagttcgagaagtttggtatgtcaccatctaaaggagtcctattc
tacggtcctcccggttgtgggaagacccttttggccaaggctatcgccaacgagtgccaa
gccaacttcatcagcatcaaaggtccagagcttctcacaatgtggtttggagagagtgaa
gccaacgtcagagagatattcgacaaagcacgccagtccgctccttgtgtcctgttcttt
gatgagctcgactccatcgccactcagagaggtagcagcgttggagacgctggtggtgca
gcagacagagtgttgaaccagcttcttacggagatggatggtatgtctgccaagaagact
gtctttatcatcggagcaacgaacagaccagatatcatcgaccctgcgcttcttcgacct
ggtcgtctcgaccagctcatctacattcctctccctgatgaggagtctcgttaccagatc
tttaagtcttgcttgaggaaatctccggtggctaaagatgttgacttgagggctcttgct
aaatacactcaagggtttagtggcgcggacatcacagagatttgtcagcgttcttgcaag
tacgcgatcagagagaacatcgagaaggatattgagaaggagaggaagagagcagaggca
ccagaagcaatggaagaggatgaggaggagattgcagatattaaagctggtcattttgag
gaatcaatgaagtacgcgaggagatcagtgagtgatgcagacattcgcaagtatcaggca
tttgctcagactctccaacagtctcgtgggtttggaagtgagttcaggtttcctcaagtg
acaggggcaggagccgctgccaccacggctggtggagctgacccgtttgctactacggga
ggagcagcagccgaggacgatgatctctatagttaa
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