Brevundimonas naejangsanensis: DA69_12670
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Entry
DA69_12670 CDS
T04375
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bne
Brevundimonas naejangsanensis
Pathway
bne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DA69_12670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bne03019
]
DA69_12670
03016 Transfer RNA biogenesis [BR:
bne03016
]
DA69_12670
Enzymes [BR:
bne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DA69_12670
Messenger RNA biogenesis [BR:
bne03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DA69_12670
Transfer RNA biogenesis [BR:
bne03016
]
Prokaryotic type
tRNA degradation factors
DA69_12670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_2
PHB_acc_N
Motif
Other DBs
NCBI-ProteinID:
ANF55516
UniProt:
A0A172Y8P0
LinkDB
All DBs
Position
2635527..2637761
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AA seq
744 aa
AA seq
DB search
MFDIKRKTIEWAGRPLTLETGRIARQADGAVLATYGETVVLATVVYGRQPKPGLDFFPLT
VNYQEKTFAAGKIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVKGFKNETQVIVTVLQH
DLENDPDILGMVAASAALTISGVPFMGPIGAARVGMIDGELVLNPAIDTLGESALDLVVA
GTQDAIMMVESEAKELSEEKMLEALMFAHAGMQPVIDAIIDLAEHAAKEPFDFQAEDHSD
VVASIKSLVGEEIKAAYAHPGKYERRSGVDAAKKKAAEALVKTDENPDGVDSSKFSAAFK
ECEADVLRRDIIENSHRVDGRALDKVRAIVSEVGVLPRTHGSSLFTRGETQALVVATLGT
GEDEQYIDSLTGTYKESFLLHYNFPPYSVGEAGRMGSPGRREIGHGKLAWRAIRPMLPSR
EDFPYTIRLVSEITESNGSSSMATVCGSSLALMDAGVPLVRPVSGIAMGLILEPSGEFAI
LSDILGDEDHLGDMDFKVAGTSEGITSLQMDIKVAGITKEIMQQALTQASAGRLHILEEM
SKAMEAPRAELGEFAPKIESIKIAVDKIREVIGSGGKVIREIVEKTGAKVDIGDDGTIKI
AANEQEKIEAAKAWIQSIASEPEVGTIYTGKVVKVVDFGAFVNFFGAKDGLVHVSQIALE
RVANPADVLSEGQEVKVKFLGFDDRGKTKLSMKVVDQETGEDITDKINAERAERGEAPLS
EDTGGRPKRDGDRNGGDRGRRRRD
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatatcaaacgcaagacgatcgagtgggccggccgcccgctgaccctggagacg
ggccgcatcgcccgtcaggccgacggcgccgtgctggcgacctacggcgagaccgtggtc
ctggccaccgtcgtctacggccgtcagcccaagccgggcctggatttcttcccgctgacc
gtcaactaccaagagaagacgttcgccgccggcaagatcccgggcggctacttcaagcgt
gaaggccgtccgaccgagaaggagaccctggtctcccgcctgatcgaccgcccgatccgc
cccctgttcgtcaagggcttcaagaacgagacccaggtcatcgtcaccgtgctgcagcac
gaccttgagaacgaccccgacatcctgggcatggtcgccgcctcggccgccctgaccatc
tcgggcgtgcccttcatgggcccgatcggcgccgcgcgcgtcggcatgatcgacggcgag
ctggtgctgaacccggccatcgacaccctgggcgagagcgccctggatctggtcgtcgcc
ggcacgcaagacgccatcatgatggtcgaatccgaagccaaggagctgtcggaagagaag
atgctcgaggccctgatgttcgcgcacgcgggcatgcagccggtgatcgacgccatcatc
gacctggccgagcacgccgccaaggagccgttcgacttccaggccgaagaccactcggac
gtggtcgcctcgatcaagtcgctggtcggcgaagagatcaaggccgcctacgcccacccg
ggcaagtacgagcgccgctcgggcgtggacgccgccaagaagaaggccgccgaggccctg
gtgaagaccgacgagaatccggacggcgtcgactcgtcgaagttctcggccgcgttcaag
gagtgcgaagccgacgtcctgcgtcgcgacatcatcgagaacagccaccgcgtcgacggc
cgcgccctggacaaggtccgcgccatcgtttcggaagtcggcgtcctgccgcgcacccac
ggttcgtcgctgttcacgcgcggcgaaacgcaagctctggtcgtcgccacgctcggcacc
ggcgaggacgagcagtacatcgacagcctgacgggcacctacaaagagtccttcctgctg
cactacaacttcccgccctattcggtcggtgaagcgggccgcatgggctcgccgggccgt
cgcgaaatcggtcacggcaagctggcctggcgcgccatccgcccgatgctgccgtcgcgc
gaagacttcccctacaccatccgcctggtgtcggagatcaccgagtccaacggctcgtcc
tcgatggccacggtctgcggttcgtcgctagccctgatggacgccggcgtgccgctggtc
cgtccggtctcgggcatcgccatgggtctgatcctggagccgtcgggcgagttcgccatc
ctgtcggacatcctgggtgacgaagaccacctgggcgacatggacttcaaggtcgcgggc
acctcggaaggcatcaccagccttcagatggatatcaaggtcgccggcatcaccaaggag
atcatgcagcaggccctgacgcaggcttcggccggccgtctgcacatccttgaggaaatg
tccaaggcgatggaggccccgcgcgccgagctgggcgagttcgcgcccaagatcgaatcc
atcaagatcgcggtcgataagatccgcgaagtgatcggttcgggcggcaaggtcatccgc
gaaatcgtcgagaagaccggcgccaaggtcgacatcggcgatgacggcaccatcaagatc
gccgccaacgagcaggagaagatcgaagccgccaaggcctggatccagtccatcgcctcg
gagccggaagtcggcacgatctacaccggcaaggtcgtgaaggtcgtcgacttcggcgcc
ttcgtgaacttcttcggcgccaaggacggcctggtccacgtgtcccagatcgctctggag
cgcgtcgccaacccggccgacgtcctgtcggaaggccaggaggtcaaggtcaagttcctg
ggcttcgacgatcgcggcaagaccaagctgtcgatgaaggtcgtcgatcaggaaaccggc
gaggacatcaccgacaagatcaacgccgagcgcgctgagcgcggcgaagctccgctgtcg
gaagacaccggcgggcgtcccaagcgtgacggcgaccgcaacggcggcgaccgcggccgt
cgccgtcgcgactaa
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