KEGG   Brevundimonas naejangsanensis: DA69_12670
Entry
DA69_12670        CDS       T04375                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
bne  Brevundimonas naejangsanensis
Pathway
bne03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bne00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DA69_12670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bne03019]
    DA69_12670
   03016 Transfer RNA biogenesis [BR:bne03016]
    DA69_12670
Enzymes [BR:bne01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     DA69_12670
Messenger RNA biogenesis [BR:bne03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     DA69_12670
Transfer RNA biogenesis [BR:bne03016]
 Prokaryotic type
  tRNA degradation factors
   DA69_12670
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 S1_2 PHB_acc_N
Other DBs
NCBI-ProteinID: ANF55516
UniProt: A0A172Y8P0
LinkDB
Position
2635527..2637761
AA seq 744 aa
MFDIKRKTIEWAGRPLTLETGRIARQADGAVLATYGETVVLATVVYGRQPKPGLDFFPLT
VNYQEKTFAAGKIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVKGFKNETQVIVTVLQH
DLENDPDILGMVAASAALTISGVPFMGPIGAARVGMIDGELVLNPAIDTLGESALDLVVA
GTQDAIMMVESEAKELSEEKMLEALMFAHAGMQPVIDAIIDLAEHAAKEPFDFQAEDHSD
VVASIKSLVGEEIKAAYAHPGKYERRSGVDAAKKKAAEALVKTDENPDGVDSSKFSAAFK
ECEADVLRRDIIENSHRVDGRALDKVRAIVSEVGVLPRTHGSSLFTRGETQALVVATLGT
GEDEQYIDSLTGTYKESFLLHYNFPPYSVGEAGRMGSPGRREIGHGKLAWRAIRPMLPSR
EDFPYTIRLVSEITESNGSSSMATVCGSSLALMDAGVPLVRPVSGIAMGLILEPSGEFAI
LSDILGDEDHLGDMDFKVAGTSEGITSLQMDIKVAGITKEIMQQALTQASAGRLHILEEM
SKAMEAPRAELGEFAPKIESIKIAVDKIREVIGSGGKVIREIVEKTGAKVDIGDDGTIKI
AANEQEKIEAAKAWIQSIASEPEVGTIYTGKVVKVVDFGAFVNFFGAKDGLVHVSQIALE
RVANPADVLSEGQEVKVKFLGFDDRGKTKLSMKVVDQETGEDITDKINAERAERGEAPLS
EDTGGRPKRDGDRNGGDRGRRRRD
NT seq 2235 nt   +upstreamnt  +downstreamnt
atgttcgatatcaaacgcaagacgatcgagtgggccggccgcccgctgaccctggagacg
ggccgcatcgcccgtcaggccgacggcgccgtgctggcgacctacggcgagaccgtggtc
ctggccaccgtcgtctacggccgtcagcccaagccgggcctggatttcttcccgctgacc
gtcaactaccaagagaagacgttcgccgccggcaagatcccgggcggctacttcaagcgt
gaaggccgtccgaccgagaaggagaccctggtctcccgcctgatcgaccgcccgatccgc
cccctgttcgtcaagggcttcaagaacgagacccaggtcatcgtcaccgtgctgcagcac
gaccttgagaacgaccccgacatcctgggcatggtcgccgcctcggccgccctgaccatc
tcgggcgtgcccttcatgggcccgatcggcgccgcgcgcgtcggcatgatcgacggcgag
ctggtgctgaacccggccatcgacaccctgggcgagagcgccctggatctggtcgtcgcc
ggcacgcaagacgccatcatgatggtcgaatccgaagccaaggagctgtcggaagagaag
atgctcgaggccctgatgttcgcgcacgcgggcatgcagccggtgatcgacgccatcatc
gacctggccgagcacgccgccaaggagccgttcgacttccaggccgaagaccactcggac
gtggtcgcctcgatcaagtcgctggtcggcgaagagatcaaggccgcctacgcccacccg
ggcaagtacgagcgccgctcgggcgtggacgccgccaagaagaaggccgccgaggccctg
gtgaagaccgacgagaatccggacggcgtcgactcgtcgaagttctcggccgcgttcaag
gagtgcgaagccgacgtcctgcgtcgcgacatcatcgagaacagccaccgcgtcgacggc
cgcgccctggacaaggtccgcgccatcgtttcggaagtcggcgtcctgccgcgcacccac
ggttcgtcgctgttcacgcgcggcgaaacgcaagctctggtcgtcgccacgctcggcacc
ggcgaggacgagcagtacatcgacagcctgacgggcacctacaaagagtccttcctgctg
cactacaacttcccgccctattcggtcggtgaagcgggccgcatgggctcgccgggccgt
cgcgaaatcggtcacggcaagctggcctggcgcgccatccgcccgatgctgccgtcgcgc
gaagacttcccctacaccatccgcctggtgtcggagatcaccgagtccaacggctcgtcc
tcgatggccacggtctgcggttcgtcgctagccctgatggacgccggcgtgccgctggtc
cgtccggtctcgggcatcgccatgggtctgatcctggagccgtcgggcgagttcgccatc
ctgtcggacatcctgggtgacgaagaccacctgggcgacatggacttcaaggtcgcgggc
acctcggaaggcatcaccagccttcagatggatatcaaggtcgccggcatcaccaaggag
atcatgcagcaggccctgacgcaggcttcggccggccgtctgcacatccttgaggaaatg
tccaaggcgatggaggccccgcgcgccgagctgggcgagttcgcgcccaagatcgaatcc
atcaagatcgcggtcgataagatccgcgaagtgatcggttcgggcggcaaggtcatccgc
gaaatcgtcgagaagaccggcgccaaggtcgacatcggcgatgacggcaccatcaagatc
gccgccaacgagcaggagaagatcgaagccgccaaggcctggatccagtccatcgcctcg
gagccggaagtcggcacgatctacaccggcaaggtcgtgaaggtcgtcgacttcggcgcc
ttcgtgaacttcttcggcgccaaggacggcctggtccacgtgtcccagatcgctctggag
cgcgtcgccaacccggccgacgtcctgtcggaaggccaggaggtcaaggtcaagttcctg
ggcttcgacgatcgcggcaagaccaagctgtcgatgaaggtcgtcgatcaggaaaccggc
gaggacatcaccgacaagatcaacgccgagcgcgctgagcgcggcgaagctccgctgtcg
gaagacaccggcgggcgtcccaagcgtgacggcgaccgcaacggcggcgaccgcggccgt
cgccgtcgcgactaa

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