Bombella sp. ESL0368: GN304_02815
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Entry
GN304_02815 CDS
T06372
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bob
Bombella sp. ESL0368
Pathway
bob03030
DNA replication
bob03410
Base excision repair
bob03420
Nucleotide excision repair
bob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GN304_02815 (polA)
03410 Base excision repair
GN304_02815 (polA)
03420 Nucleotide excision repair
GN304_02815 (polA)
03440 Homologous recombination
GN304_02815 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bob03032
]
GN304_02815 (polA)
03400 DNA repair and recombination proteins [BR:
bob03400
]
GN304_02815 (polA)
Enzymes [BR:
bob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GN304_02815 (polA)
DNA replication proteins [BR:
bob03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GN304_02815 (polA)
DNA repair and recombination proteins [BR:
bob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GN304_02815 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GN304_02815 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
DprA_N
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QGT75878
LinkDB
All DBs
Position
639280..642159
Genome browser
AA seq
959 aa
AA seq
DB search
MTDREPFLKRRKSAREESICKTDLPARAGEKDGVTSENTHLVLVDGSGFIFRAFFAIPPM
SSPEGVPVNAVYGFTNMLSRLIKEHEGQPMAVIFDAGRRTFRNDIYPDYKAHRPEPPEDL
RPQFDLIRQATDQFGIPAIELPGWEADDLLATYARLVVEQGGSCTIISSDKDLMQLVRPG
VSLKDPMKQKPIGLAEVEAKFGVTPDKVVDVQALMGDSTDNVPGVPGIGPKGAAQLINEY
GSLEAVLAAAPGMKPSKRRQNLIDHAEGARISRQLVLLADDVAVPTPVDELRPREPDAET
LRSWLESMGFSSILQRMGFGGKARHPAQRRPEASPASAAAEGQDAGEIPRSEAPFGPYET
VTDRDTLARWIDAARAAGRVAVDTETTGLNARTAEIVGLSLAVAPGRACYVPFRHEGTLE
APVGDQLDVKATLDQLAPLMADEAVLKIFQNAKYDLTILRQAGLEVIAPLDDTMLLSYAQ
SAGAHGQGMDELSRLHLDHTPIPYDDVTGKGRNRVPFTQVPLDKATAYAADDADVTLRLW
EVLRVTLPRQKAAALYEEMERPLITVLERMEEAGVRVDADELRRLSEDFATRMAEMEQGI
HDRAGRPFNIGSPKQLGEILFDEMGLPGGKRTKTGSWGTDSRVLEELAEQGHDLPTAILN
WRRLAKLKSTYADALLKLMDPKTQRVHTTFQMTTTTTGRLSSNEPNLQNIPIRTEEGARI
RQAFVAAPGYRLLSADYSQIELRLLAHVAQIEPLLDAFRHGQDIHARTASEVFGIPLEEM
DPLTRRRAKAINFGIIYGISAFGLARQLQVPQGEAKRYIEAYFDRYPGIRDYMEKMKEEA
REKGYVLTPFGRRCYVPGITAKQAAQRSYAERQAINAPLQGGAADIIKKAMVTLPDRLAE
AGLKARMLLQVHDELLFEVPEAEAEETAALVREVMESVARLDVALSVETGLGQNWAEAH
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgacggacagggagccgtttttaaaacggcggaaatcggctagagaagaaagcatctgc
aagactgatctgccagcacgggcaggggagaaagacggcgtgacgtcagaaaacacacat
ctggttctggtggatggttcggggttcattttccgtgccttctttgccattccccccatg
agcagtccggagggtgtgcccgtcaatgccgtctatggcttcaccaacatgctctcccgg
ctcatcaaggagcatgaaggccagccgatggccgtgatcttcgatgcaggccgcaggaca
ttccgtaacgacatttaccctgattataaagcccatcgccccgaaccgccggaagacctg
cgcccccagttcgacctcatccgtcaggcgaccgaccagttcgggattccggccatcgag
ctgccgggctgggaggcggatgacctgctggcgacctatgcccgcctggtcgtggagcag
ggcggcagctgcaccatcatctcgtcagacaaggacctgatgcagcttgtccgccccggt
gtctccctgaaagacccgatgaagcagaagcccatcggtctggccgaggttgaagccaag
tttggcgtcacgccggacaaggtggtggatgtgcaggccctcatgggggattccacggac
aacgtgccgggcgtgccgggcatcggccccaagggagcggcgcagctgatcaatgaatat
ggatcgctggaggccgttctggcagcagcccccgggatgaagccttccaagcggcggcag
aatctgatcgatcacgccgaaggtgcccgcatctcccggcagcttgtcctgctggcggat
gatgtggccgtgccgacacctgtcgatgagctgcgtccccgtgagccggacgccgaaacg
ttgcggagctggctggagagcatggggttctcttccattctccagcgcatgggttttggc
ggcaaggcccgtcacccggcacagcgcaggcccgaggccagcccggcctcagctgcggca
gaggggcaggatgccggggagataccccggagtgaggctcctttcggtccctatgagacc
gtcacggacagggacacgctggcccggtggatcgacgccgcccgtgccgcaggacgtgtg
gccgtggatacggaaacaaccggcctgaacgcccgcacggctgaaattgttggcctgtct
ctggccgtggctccgggcagggcctgttatgtgccgttccgtcatgaaggcacgctggaa
gctcccgtgggcgaccagctggacgtgaaggccacgctggatcagctggccccgctgatg
gccgatgaggccgtcctgaagattttccagaatgcaaaatatgacctcaccatcctgcgg
caggccggtctggaggtcattgccccgctggatgatacaatgctgctgtcctacgcccag
tccgccggggcgcacgggcagggcatggatgaactctcccgcctgcatctggatcatacc
cccattccctatgatgacgtgacgggcaaggggcgcaaccgggtgcctttcacgcaggtg
ccgctggataaagcgactgcctatgcagcggacgacgccgacgtgacgctgcgcctctgg
gaggtgctgcgtgtgacgctgccccgccagaaggcggcggccctgtatgaggaaatggaa
cgcccgctcatcaccgttctggagcgcatggaggaagctggcgtgcgggtggacgccgat
gagctgcgccgcctgtcggaggatttcgccacccgcatggcggagatggaacaggggatt
catgatcgggcggggcggcccttcaacatcgggtcgcccaagcagctgggggaaatcctg
tttgatgagatgggccttcccggtggcaagcgcaccaaaacgggctcgtggggaacggat
tcccgtgtgctggaagagctggccgagcagggccatgatctgccgacggcaatcctgaac
tggcggcgtctggccaagctgaaatccacctatgcggatgcgctgctcaagctgatggac
ccgaagacccagcgtgtgcataccaccttccagatgacgaccacgaccacggggcgtctc
tcctccaacgagccgaacctccagaacattcccatccgcacggaggagggggcacgcatc
cgtcaggctttcgtggcggctccggggtacaggcttctgtctgccgattacagccagatc
gagctgcgccttctggcccatgtggcacagattgagccattgctggatgcgttccgtcac
gggcaggacatccatgcccgcacggcgtccgaagtgttcggcatcccgttggaagagatg
gacccgctgacaaggcgacgggccaaggccatcaatttcggcatcatttacggcatttcg
gccttcgggctggcccggcagcttcaggtgccgcagggcgaggccaaacgctatatcgag
gcctattttgaccgctatcccggtatccgggattatatggaaaagatgaaggaagaggcc
cgggagaagggttatgtgctgacccccttcggtcgccgctgctatgtgccgggaatcacg
gcaaagcaggcagcgcagcggtcctatgccgagcgtcaggccatcaatgctcccctgcag
ggtggggcggcggacatcatcaagaaggccatggtcaccctgccggaccgtctggccgag
gccgggctgaaggcccggatgctgcttcaggtacatgatgagctgctttttgaagtcccg
gaagccgaggctgaggagacggcggccctcgtgagggaggtcatggaatctgtggccagg
ctggatgtggccctctccgtggaaacggggcttggccagaactgggctgaggcgcactga
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