Burkholderia oklahomensis C6786: BG90_1827
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Entry
BG90_1827 CDS
T03861
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
boc
Burkholderia oklahomensis C6786
Pathway
boc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
boc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BG90_1827 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boc03021
]
BG90_1827 (rpoA)
03400 DNA repair and recombination proteins [BR:
boc03400
]
BG90_1827 (rpoA)
Enzymes [BR:
boc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BG90_1827 (rpoA)
Transcription machinery [BR:
boc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BG90_1827 (rpoA)
DNA repair and recombination proteins [BR:
boc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BG90_1827 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AJX32929
UniProt:
A0A7U5DJU7
LinkDB
All DBs
Position
I:2012911..2013888
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AA seq
325 aa
AA seq
DB search
MQTSLLKPKIIAVESLGENHAKVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VVHEYSTLDGVQEDVVNLLLNLKGVVFKLHNRDEVTVTLRKEGEGVVTAGDIELAHDCEV
INPNHVIAHLSKGGKLDVQIKVEKGRGYVPGNVRRYGDETAKIIGRIVLDASFSPVRRVS
YAVESARVEQRTDLDKLVMNIETSGVITPEEAIRQSARILVDQLSVFAALEGTETAAEAP
SRAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLDK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccagtttgttgaaacccaagatcatcgccgtggaatcgcttggcgagaaccac
gcgaaagtggtgatggagccgttcgaacgcggttacggccacaccttgggcaatgcgctt
cgccgcgtgctcctgtcgtcgatggtcggctatgcgccgaccgaagtgacgatcgccggt
gtcgtgcacgagtattcgacgcttgatggtgtgcaagaggacgtcgtcaacctgctgctg
aacctgaagggcgtggtgttcaagctgcataaccgcgacgaagtcacggtgacgctgcgc
aaggaaggcgaaggcgtcgtgacggccggcgatatcgaactggcccacgactgcgaagtc
atcaacccgaatcacgtgatcgcgcatctgtcgaagggcggcaagctcgacgtgcagatc
aaggtcgagaagggccgcggctacgtgccgggcaacgtgcgccgctacggcgacgaaacg
gcgaagatcatcggccgcatcgtcctcgacgcgtcgttctcgccggttcgccgtgtgagc
tatgcagtcgagagcgcgcgcgtcgaacagcgcaccgacctcgacaagctcgtgatgaac
atcgaaacgagcggcgtcatcacgccggaagaagcgatccgccaatcggcgcgcatcctc
gtcgaccagctgtccgtgttcgcggcgctggaaggcacggaaacggccgcggaagcgccg
tcgcgcgcgccgcagatcgacccgatcctgctgcgtccggtcgatgatctcgagctgacc
gtccgttcggcgaactgcctgaaggccgagaacatctactacatcggcgacctgatccag
cgcacggaaaacgagctgctgaagacgccgaacctcggccgcaagtcgctcaacgagatc
aaggaagtgctcgcttcgcgcggtctcacgctgggcatgaagctcgagaactggccgccg
gctggcctcgacaagtaa
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